Protein Alignment CG34031 and hoxc5a

DIOPT Version :10

• Sequence 1: NP_001246894.1
• Gene: CG34031 / 3885665
• FlyBaseID: FBgn0054031
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_571219.2
• Gene: hoxc5a / 30379
• ZFINID: ZDB-GENE-980526-533
• Length: 233
• Species: Danio rerio
• Alignment Length: 234
• Identity: 66/234 - (28%)
• Similarity: 101/234 - (43%)
• Gaps: 52/234 - (22%)

  Fly    12 LNSCIEKSI--QTKKKGKLGAFSIDSILSTSEAHSSQ------------------NSLPKDNTNV 56
            ::|.:.||.  ||:........:.|:..:.||.|.|.                  |||.::..|.
Zfish     1 MSSYVGKSFSKQTQDASSCRMHTFDNYGAHSEFHESNYAYEGLDLGGSFSSQIPTNSLRREAINT 65

  Fly    57 T-----------SSDISKLYAFSF-TQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSR---FVW 106
            |           :...|.|.:.|| :..|.|  ||::..|.|.....:.:....|..||   ...
Zfish    66 TDRARSSAAVQRTQSCSALGSRSFVSTHGYN--PLSHGLLSQKAEGNMEVMEKPSGKSRTDDIKM 128

  Fly   107 RTESILPSYITNST---NLQEKQLRKRFT---------DRKPRQAYSASQLERLENEFNLDKYLS 159
            .|.|.:... ||||   |..:.|:....|         .::.|.:|:..|...||.||:.::||:
Zfish   129 ETTSAIKQQ-TNSTQRQNQSQPQIYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLT 192

  Fly   160 VSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKI 198
            ..:|:|::.:|.|.|.|:|.||||||.||||.  |:||:
Zfish   193 RRRRIEIANNLCLNERQIKIWFQNRRMKWKKD--SKLKV 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeodomain	134..190	CDD:459649	24/55 (44%)
hoxc5a	NP_571219.2	Homeodomain	167..223	CDD:459649	24/55 (44%)