DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG34031 and hoxc5a

DIOPT Version :9

Sequence 1:	NP_001246894.1	Gene:	CG34031 / 3885665	FlyBaseID:	FBgn0054031	Length:	219	Species:	Drosophila melanogaster
Sequence 2:	NP_571219.2	Gene:	hoxc5a / 30379	ZFINID:	ZDB-GENE-980526-533	Length:	233	Species:	Danio rerio

Alignment Length:	234	Identity:	66/234 - (28%)
Similarity:	101/234 - (43%)	Gaps:	52/234 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 LNSCIEKSI--QTKKKGKLGAFSIDSILSTSEAHSSQ------------------NSLPKDNTNV 56
            ::|.:.||.  ||:........:.|:..:.||.|.|.                  |||.::..|.
Zfish     1 MSSYVGKSFSKQTQDASSCRMHTFDNYGAHSEFHESNYAYEGLDLGGSFSSQIPTNSLRREAINT 65

  Fly    57 T-----------SSDISKLYAFSF-TQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSR---FVW 106
            |           :...|.|.:.|| :..|.|  ||::..|.|.....:.:....|..||   ...
Zfish    66 TDRARSSAAVQRTQSCSALGSRSFVSTHGYN--PLSHGLLSQKAEGNMEVMEKPSGKSRTDDIKM 128

  Fly   107 RTESILPSYITNST---NLQEKQLRKRFT---------DRKPRQAYSASQLERLENEFNLDKYLS 159
            .|.|.:... ||||   |..:.|:....|         .::.|.:|:..|...||.||:.::||:
Zfish   129 ETTSAIKQQ-TNSTQRQNQSQPQIYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLT 192

  Fly   160 VSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKI 198
            ..:|:|::.:|.|.|.|:|.||||||.||||.  |:||:
Zfish   193 RRRRIEIANNLCLNERQIKIWFQNRRMKWKKD--SKLKV 229

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeobox	136..189	CDD:278475	23/52 (44%)
hoxc5a	NP_571219.2	Homeobox	169..222	CDD:278475	23/52 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910