DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and Dlx4

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:203 Identity:57/203 - (28%)
Similarity:81/203 - (39%) Gaps:42/203 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPI 94
            |.|.|...|.:..|....|.|...|...|      |..|..|   :..|...|.....||:.|..
  Rat    40 AASPDLSFSQTYGHLLSYSYPGPATPGDS------YLSSQQQ---SAAPSRPFHQPTEHPQELEA 95

  Fly    95 TFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLS 159
                        .:|.:..|...:..:|..|.       ||||..||:.||:.|...|...:||:
  Rat    96 ------------ESEKLALSLEPSQPSLTRKL-------RKPRTIYSSLQLQHLNQRFQHTQYLA 141

  Fly   160 VSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQL-----------TSRLKIAHRHGLWIPT---LP 210
            :.:|.:|:..|.||:.|||.||||:|:|:||.|           :.|......|.|.:|:   ||
  Rat   142 LPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQSSGELEEDFSGRPPSLSPHSLTLPSIWDLP 206

  Fly   211 ITTIIPNT 218
            ....:|.:
  Rat   207 KAGTLPTS 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 26/55 (47%)
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 26/55 (47%)

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