Protein Alignment CG34031 and Cdx4

DIOPT Version :10

• Sequence 1: NP_001246894.1
• Gene: CG34031 / 3885665
• FlyBaseID: FBgn0054031
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 95
• Identity: 30/95 - (31%)
• Similarity: 52/95 - (54%)
• Gaps: 13/95 - (13%)

  Fly   102 SRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVEL 166
            |.:.|..:::   .:|..|..:||.          |..|:..|...||.||:.::|:::.::.||
  Rat   159 SPYAWMRKTV---QVTGKTRTKEKY----------RVVYTDHQRLELEKEFHCNRYITIRRKSEL 210

  Fly   167 SKSLSLTEVQVKTWFQNRRTKWKKQLTSRL 196
            :.:|.|:|.|||.||||||.|.:|.:..::
  Rat   211 AVNLGLSERQVKIWFQNRRAKERKMIKKKI 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeodomain	134..190	CDD:459649	23/55 (42%)
Cdx4	NP_001100412.1	Caudal_act	13..174	CDD:461413	3/17 (18%)
		Homeodomain	179..234	CDD:459649	24/64 (38%)