DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and Dbx1

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001009644.1 Gene:Dbx1 / 292934 RGDID:1308896 Length:335 Species:Rattus norvegicus


Alignment Length:214 Identity:55/214 - (25%)
Similarity:86/214 - (40%) Gaps:46/214 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTN--VTSSDISKLYAFSFTQE 72
            ||..|..:.::....:.....|.:::|||         |.|:..|:  :..|...|.:||.:   
  Rat    89 SRRGSSPQTALSPASEPTFLKFGVNAILS---------SAPRRETSPALLQSPPPKTFAFPY--- 141

  Fly    73 GNNKTPLTNFDLCQGHPRRLPITFDGS----TVSRFVWRTESILPSYITNSTNLQEKQLRKRFTD 133
                                   |:||    ..|.:...:.|::|...|.|..|..:...:|...
  Rat   142 -----------------------FEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGML 183

  Fly   134 RKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKI 198
            |  |..:|..|.:.||..|...||:|...|.:|:..|.|.:.|||.||||||.||:.  :...::
  Rat   184 R--RAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRN--SKEREL 244

  Fly   199 AHRHGLWIPTLPITTIIPN 217
            ....|....||| |.:.|:
  Rat   245 LSSGGCREQTLP-TKLNPH 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 25/55 (45%)
Dbx1NP_001009644.1 PRK12323 <49..182 CDD:481241 24/127 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102 3/12 (25%)
Homeodomain 184..238 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 6/24 (25%)

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