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Protein Alignment CG34031 and Hoxb9

DIOPT Version :9

Sequence 1:	NP_001246894.1	Gene:	CG34031 / 3885665	FlyBaseID:	FBgn0054031	Length:	219	Species:	Drosophila melanogaster
Sequence 2:	NP_001093967.1	Gene:	Hoxb9 / 287647	RGDID:	1306158	Length:	250	Species:	Rattus norvegicus

Alignment Length:	73	Identity:	32/73 - (43%)
Similarity:	43/73 - (58%)	Gaps:	1/73 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly   118 NSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQ 182
            :.||.....|..| :.||.|..|:..|...||.||..:.||:..:|.|:::.|:|:|.|||.|||
  Rat   171 DQTNPSANWLHAR-SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQ 234

  Fly   183 NRRTKWKK 190
            |||.|.||
  Rat   235 NRRMKMKK 242

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.