DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG34031 and Hoxc6

DIOPT Version :9

Sequence 1:	NP_001246894.1	Gene:	CG34031 / 3885665	FlyBaseID:	FBgn0054031	Length:	219	Species:	Drosophila melanogaster
Sequence 2:	XP_038936324.1	Gene:	Hoxc6 / 252885	RGDID:	620626	Length:	243	Species:	Rattus norvegicus

Alignment Length:	200	Identity:	64/200 - (32%)
Similarity:	94/200 - (47%)	Gaps:	42/200 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 LGAFSIDSI--LSTSEAHSSQNSL-------PKDNTNVTSSDISKLY-AFSFTQEGNNKTPLTNF 82
            |.:.:.|.:  .||..|..:||.:       |::|...:||.....| :.||.||   |..|:|
  Rat    26 LNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQE---KDMLSN- 86

  Fly    83 DLCQ----GHPRRLPITFDGS-------------TVSRFVW--RTESILPSYITNSTNLQEKQLR 128
              |:    ||..:..|..|.|             ::..:.|  |..|....::..|..:.....|
  Rat    87 --CRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSVCFVPGSLGVGYGADR 149

  Fly   129 KRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQ-- 191
                 |:.||.||..|...||.||:.::||:..:|:|::.:|.|||.|:|.||||||.||||:
  Rat   150 -----RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESN 209

  Fly   192 LTSRL 196
            |||.|
  Rat   210 LTSTL 214

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeobox	136..189	CDD:278475	26/52 (50%)
Hoxc6	XP_038936324.1	Homeobox	153..206	CDD:395001	27/52 (52%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000