Protein Alignment CG34031 and Hoxc4

DIOPT Version :10

• Sequence 1: NP_001246894.1
• Gene: CG34031 / 3885665
• FlyBaseID: FBgn0054031
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 86
• Identity: 34/86 - (39%)
• Similarity: 49/86 - (56%)
• Gaps: 21/86 - (24%)

  Fly   134 RKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKI 198
            ::.|.||:..|:..||.||:.::||:..:|:|::.||.|:|.|:|.||||||.||||.
  Rat   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD------- 214

  Fly   199 AHRHGLWIPTLPITTIIPNTK 219
             ||             :||||
  Rat   215 -HR-------------LPNTK 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34031	NP_001246894.1	Homeodomain	134..190	CDD:459649	26/55 (47%)
Hoxc4	NP_001103354.1	Homeodomain	157..213	CDD:459649	26/55 (47%)