DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and pha-2

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_508131.4 Gene:pha-2 / 187454 WormBaseID:WBGene00004011 Length:214 Species:Caenorhabditis elegans


Alignment Length:211 Identity:60/211 - (28%)
Similarity:93/211 - (44%) Gaps:62/211 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNT------------------N 55
            |..::|.:::...:|:|.:..:.|  .|.:.||...:::|   |.|                  |
 Worm     4 KFYISSLLQEDTPSKEKPETSSES--PIPTGSECSLNESS---DTTLDQKMEPNKKMFNGTLDFN 63

  Fly    56 VTSSDISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPI-------TFDGSTVSRFVWRTESILP 113
            .....:|:..|...:|.|.|:         .|.|.::|:       |.......|..|     |.
 Worm    64 PWICHVSQQLAAQLSQNGKNR---------PGAPNQVPLLNMNVNQTMGNMWDPRLSW-----LY 114

  Fly   114 SYITNSTNLQEKQLRK----RFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTE 174
            .|::.|     .|.||    |||:         .|.:.||::|:..||||..:|.:|:|||||:|
 Worm   115 PYMSKS-----PQKRKGGQIRFTN---------EQTDALEHKFDSHKYLSPQERKKLAKSLSLSE 165

  Fly   175 VQVKTWFQNRRTKWKK 190
            .||||||||||.||::
 Worm   166 RQVKTWFQNRRAKWRR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 27/52 (52%)
pha-2NP_508131.4 Homeobox 130..181 CDD:365835 31/59 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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