DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and Pitx3

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus


Alignment Length:196 Identity:50/196 - (25%)
Similarity:86/196 - (43%) Gaps:24/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISK----LYAFSFTQEGNNKTP-LTNFDLCQG 87
            |||.|::|....|..:    .||...:.....:|.:    ...|....|...::| |:..|....
Mouse    50 LGAHSLNSACHCSGCY----PLPGPPSTEIEDEIKRQRPPSMEFGLLGEAEARSPALSLSDAGTP 110

  Fly    88 HPRRLPITFDGSTVSRF--VWRTESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLEN 150
            ||   |:...|......  ..:..:.||.......:|::||       |:.|..:::.||:.||.
Mouse   111 HP---PLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQ-------RRQRTHFTSQQLQELEA 165

  Fly   151 EFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKIAHRHGLWIPTLPITTII 215
            .|..::|..:|.|.|::...:|||.:|:.||:|||.||:|:..|:.....:.|.   ..|:..::
Mouse   166 TFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGGF---AAPLGGLV 227

  Fly   216 P 216
            |
Mouse   228 P 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 20/52 (38%)
Pitx3XP_006526827.1 Homeobox 152..205 CDD:365835 21/52 (40%)
PTZ00395 <228..>322 CDD:185594 1/1 (100%)
OAR 344..361 CDD:367680
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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