DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34031 and ceh-19

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:220 Identity:72/220 - (32%)
Similarity:102/220 - (46%) Gaps:69/220 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AFSIDSILST-----------SEAHSSQNSLPKDN-----------TNVTSSDISKLYAFSFTQE 72
            ||:|:|:|..           .|.:.|:.:..:|.           ||:.:|.::     .|...
 Worm     2 AFNIESLLEKKSNPVEEGNDFEEENDSEKNGEEDEEEEEKNVIDGWTNMATSQLA-----MFAIA 61

  Fly    73 GNNKTP-LTNFDLCQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLRKRFTDRKP 136
            .:.:|| |....:..|                             .::.....|:.||...:|||
 Worm    62 NDLRTPTLVELQMLLG-----------------------------VSARKHDYKRSRKSVCERKP 97

  Fly   137 RQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLTSRLKIAHR 201
            ||||||.||:|||.||..||||||:||::||::|:|||.|:|||||||||||||||||.::...:
 Worm    98 RQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSIRQMVK 162

  Fly   202 ------------HGLWIPTLPITTI 214
                        ..|..|..|.||:
 Worm   163 DAPTSTSVGVPFQSLLTPPTPPTTL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 42/55 (76%)
ceh-19NP_001023142.1 Homeodomain 95..151 CDD:459649 42/55 (76%)

Return to query results.
Submit another query.