DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and Hoxa6

DIOPT Version :9

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:97 Identity:35/97 - (36%)
Similarity:50/97 - (51%) Gaps:26/97 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NLQEKQLRKRFTDRK--------------------------PRQAYSASQLERLENEFNLDKYLS 159
            ::|.|.|.:..||||                          .||.|:..|...||.||:.::||:
Mouse   116 SVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLT 180

  Fly   160 VSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQ 191
            ..:|:|::.:|.|||.|:|.||||||.||||:
Mouse   181 RRRRIEIANALCLTERQIKIWFQNRRMKWKKE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 25/52 (48%)
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126 3/9 (33%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeobox 158..210 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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