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Protein Alignment CG34031 and Vsx2
DIOPT Version :9
Sequence 1: | NP_001246894.1 |
Gene: | CG34031 / 3885665 |
FlyBaseID: | FBgn0054031 |
Length: | 219 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001288356.1 |
Gene: | Vsx2 / 12677 |
MGIID: | 88401 |
Length: | 380 |
Species: | Mus musculus |
Alignment Length: | 86 |
Identity: | 30/86 - (34%) |
Similarity: | 46/86 - (53%) |
Gaps: | 5/86 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 LQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRT 186
|.:.:.||: |:.|..:::.|||.||..||...|..|..|..|:....|.|.:::.||||||.
Mouse 140 LNQTKKRKK---RRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRA 201
Fly 187 KWKK--QLTSRLKIAHRHGLW 205
||:| :...|..:...:||:
Mouse 202 KWRKREKCWGRSSVMAEYGLY 222
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG34031 | NP_001246894.1 |
Homeobox |
136..189 |
CDD:278475 |
21/52 (40%) |
Vsx2 | NP_001288356.1 |
Homeobox |
153..204 |
CDD:278475 |
20/50 (40%) |
OAR |
319..336 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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