DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34031 and hoxa7

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001363856.1 Gene:hoxa7 / 101734257 XenbaseID:XB-GENE-483655 Length:207 Species:Xenopus tropicalis


Alignment Length:147 Identity:50/147 - (34%)
Similarity:67/147 - (45%) Gaps:29/147 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QNSLPKDNTNVTSSDISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSRFVWRTES 110
            ||..|..:   .:||...|:..||.|    ..||    ||...|:...........|.|     .
 Frog    61 QNPFPAYS---LASDSYNLHCSSFDQ----NIPL----LCNELPKAEEAALHQQADSHF-----R 109

  Fly   111 ILPSYITNSTNLQEKQLRKRFTDRK-PRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTE 174
            |.|            .:|....||| .||.|:..|...||.||:.::||:..:|:|::.:|.|||
 Frog   110 IYP------------WMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 162

  Fly   175 VQVKTWFQNRRTKWKKQ 191
            .|:|.||||||.||||:
 Frog   163 RQIKIWFQNRRMKWKKE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 28/56 (50%)
hoxa7NP_001363856.1 Homeodomain 122..178 CDD:459649 27/55 (49%)

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