DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34031 and barx2

DIOPT Version :10

Sequence 1:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:233 Identity:68/233 - (29%)
Similarity:94/233 - (40%) Gaps:76/233 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QDKSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEA----------------------HSSQNSL 49
            |.:.||.|    |.|.|...:...|.||.|||....                      ||...|:
Zfish     4 QAELRLAS----SAQLKAARRYKTFMIDEILSKETCDYFEKLSLYSVCPSLIVRPKPLHSCTGSV 64

  Fly    50 PKDN-------TNVTSSDISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPITFDGSTVSRFVWR 107
            |..:       |:..||.:|.|...|.....:::|||:             |:.:..        
Zfish    65 PLRSYPLLSVITHQASSSVSPLSQSSPHLPPSSETPLS-------------ISSESD-------- 108

  Fly   108 TESILPSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSL 172
            ||...|            :|:|   .|:.|..::..||..||.:|...||||...|::|::||.|
Zfish   109 TEHCTP------------RLKK---PRRSRTIFTELQLLGLEKKFQKQKYLSTPDRLDLAQSLGL 158

  Fly   173 TEVQVKTWFQNRRTKWKKQLTSRLKIAHRHGLWIPTLP 210
            |::|||||:||||.||||.:   ||..|.    .||.|
Zfish   159 TQLQVKTWYQNRRMKWKKMV---LKGGHE----APTKP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 28/55 (51%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.