DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mitf and tfeb

DIOPT Version :9

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_031752001.1 Gene:tfeb / 780105 XenbaseID:XB-GENE-982675 Length:475 Species:Xenopus tropicalis


Alignment Length:632 Identity:175/632 - (27%)
Similarity:260/632 - (41%) Gaps:199/632 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 DCDCV---PLCMTNIRVSVGIDKDLEMILEMDPSIVDLGDISIDETAEPRIVGLPPLSGGPTFKT 173
            ||.|.   |.|....::.         ::::..|:|                 |||:.       
 Frog    12 DCGCELQHPCCFAAAQLP---------LVDVVSSLV-----------------LPPIM------- 43

  Fly   174 ATPTSRTQLKLQLQREQQQQMMIQQQTLDTAMDPKMHLLFGSGQGLMESEFIDSGSTSACGSGSS 238
               .||..|::||.|||.||   ::|........:.|.|                          
 Frog    44 ---ASRIGLRMQLMREQAQQ---EEQRERVQQQHQQHFL-------------------------- 76

  Fly   239 SLEQMSQLVQMDNLIDSSSGAKLKVPLQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYL 303
               |...:|.:......|:.|..:.|     ..||.:||:|.|.|||||.||:.|.:..:||.||
 Frog    77 ---QQHHIVPVTASPAISTPASFQAP-----PPVPVEVLEVQTHLENPTIYHLQQSRDKKVRDYL 133

  Fly   304 SESFKPSMWGSHTSEIKL---------------ANNSASTGN-LQNSSLQK-GICDPLERTNRFG 351
            |::: .:.:.:|.:.::|               |..|:|.|| ..||.:.: .:|..:|      
 Frog   134 SDTY-GNKFAAHLNPLRLSPKPPPAPASPAHRAARLSSSAGNSAPNSPMARMNLCSNVE------ 191

  Fly   352 CDSAVSAKRIMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSKAN 416
            .|..:.  .||..||.     ||..          ||.:..||:              |..|.::
 Frog   192 MDDVID--NIMSLDDM-----FGYP----------EPAISMPNT--------------LPFSSSH 225

  Fly   417 SSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQNDSFNFDKNF 481
            ..|.|        ::.|:|.|...:.|.|.|                                  
 Frog   226 LGLYS--------DNPRLSDTVVGVTSNSCP---------------------------------- 248

  Fly   482 NSELSIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVR 546
             ::|:||:|   |||||..||.::|||||.||||||||||||||||||||||:||.::     :.
 Frog   249 -ADLAIKRE---LTDAENRALVRERQKKDTHNMIERRRRFNINDRIKELGTLIPKTNE-----LS 304

  Fly   547 DIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLSEN 611
            |.|.||||||::||||||.::.|..:.|:.|...||:||.|::|:.||:|||.||:.||:..|..
 Frog   305 DTRWNKGTILRASVDYIKHMQKEQQKSRELETHSRQLELANKQLLLRIQELERQAQMHGLPASSP 369

  Fly   612 HLTSLSAPTQPYLKSFSL----SPTASRSRRSL-FDQPVEKKIQ---VIDGADGNMGMNQVD-EF 667
            |  .||.......:|.|:    ....:.|:.|. .|.|.....|   .:|.:..::...::| ..
 Frog   370 H--GLSPADHMKQESNSIPSIQQQLVATSQASFQMDYPAPLGYQSNTSVDTSFPSLSRTELDLML 432

  Fly   668 MEDCKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFEPKNFSEAD 714
            |||   .:...||:::....|.:.....|..:....||   :..|.|
 Frog   433 MED---TMLTSDPLMACDPVMSTLSPDTSKASSRRSSF---SIDEVD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 19/38 (50%)
HLH 505..570 CDD:238036 43/64 (67%)
tfebXP_031752001.1 MITF_TFEB_C_3_N 46..197 CDD:406384 48/194 (25%)
bHLHzip_TFEB 261..352 CDD:381497 55/95 (58%)
DUF3371 358..471 CDD:403149 26/120 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8049
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I3648
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm48159
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X566
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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