DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mitf and sre2

DIOPT Version :9

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_595229.1 Gene:sre2 / 2541044 PomBaseID:SPBC354.05c Length:793 Species:Schizosaccharomyces pombe


Alignment Length:830 Identity:174/830 - (20%)
Similarity:277/830 - (33%) Gaps:245/830 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 MSHNES---RDLVNGPNICSSMDIEVGEEPPTTSFADNIDK-ACPLPVLRSSDCDCVPLCMTNIR 124
            :||..|   |.:....::.|:...:|.......|.|.|::: ....|:|..:..|      ::|.
pombe    58 ISHVPSVGTRGIPRSYSMASAYPYQVNSNSMDASTAFNLNQDVADKPMLARNSID------SSIN 116

  Fly   125 VSVG-----------IDKDLEMILEMDPSI---------VDLGDISIDETAEPRIVGLPPLSGGP 169
            ..:|           .|...:.....||||         .|..|:||  |..|.   ||....|.
pombe   117 TELGPLESNHWFTQAQDHSRQYSSSWDPSIDPFEVKNSLHDSTDLSI--THHPH---LPINHQGN 176

  Fly   170 TFKTATPTSRTQLKLQLQREQQQQMMIQQQTLDTAMDPKMHLLFGSGQG-LMESEFIDSGSTSAC 233
            |:|.|..:        ||                           |.|| :..::|:...:|...
pombe   177 TWKHANES--------LQ---------------------------SNQGPVPNTKFVGLETTQTD 206

  Fly   234 GSGSSSLEQMSQLVQMD--NLIDSSSGAKLKVPLQSIGVDVPPQVLQVSTVLENPT-RYHVIQKQ 295
            ....||:..:.::.:.|  ..:...||.                 ....|..|||: ..|.:...
pombe   207 SYQQSSVNSVVKIEEADATYALREESGQ-----------------FNTFTGAENPSISPHSLNPN 254

  Fly   296 KNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKR 360
            ..|..:      ||:        :.|..:.....|...|:.|..:.|...:....|..|.|  |.
pombe   255 FPQYTE------KPA--------LTLLQSPKQNSNYDTSNFQNSVSDSSMQFTNEGMPSPV--KG 303

  Fly   361 IMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSKANSSLSSTRSS 425
            ||.||||:..:        ....:.:.|.....|.:....|....||    :|...:|:||.||.
pombe   304 IMSSDDAVAFN--------FSQYSTVYPQNAPENGNEFETPNKLKRT----VSSPCASISSKRSY 356

  Fly   426 SGIVNSIRISSTSSSLQSTSAPISPSVSSVATSV-SEPDDIFDDILQNDSFNFDKNFNSELSIKQ 489
            ..|...   .|..||..:...| |.|.||.:||| ...:|....|..:.:|....|....:.:..
pombe   357 GDIAQD---CSYISSKTNGGGP-SDSPSSSSTSVRGSVNDSNSPISSSATFAIQSNGVEPVGLST 417

  Fly   490 EPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRD------- 547
            :.|||:..         .|:..|||||:|.|.|:||:|.||...:|.....:.....|       
pombe   418 QEQNLSPL---------SKRSAHNMIEKRYRSNLNDKIAELRDAVPTLRSGYNSTTADELKGTYV 473

  Fly   548 ---IRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLS 609
               .:.||.|||..:.:|||.|                 :.:|:||:...|.|:.:...:..::.
pombe   474 PLSRKLNKATILSKATEYIKSL-----------------QSKNKKLIEENKILQKRLSEYTSVIQ 521

  Fly   610 ENHLTSLSAPTQPYLKSFSLSPTASRSRRSLFDQPVEKKIQVIDGADGNMGMNQVDEFMED---- 670
                .||:||:||...|....|..:...|::  .|:.|:        .::|......:..|    
pombe   522 ----ASLTAPSQPASLSLLGPPGNTPGHRNV--PPILKR--------SSIGTPSQQAYFPDAPHN 572

  Fly   671 CKYAVQGGD----PMLSSHSHMQSAPQSPSSKTLNSGSFEPKNFSEADESLFRGKSSLASDDCCG 731
            |....|...    ||..:.|.:.|....|.:           ||:|. .:.:..:..|.....|.
pombe   573 CHSVPQNSSYPRPPMQVNRSPIDSMQTIPHA-----------NFNEM-HNAYSSRYPLKYSKSCN 625

  Fly   732 INCSTSCYIQHQLTSREGHPNHSHHTGIREIHSLSDSAQNSEFSRLEHCDDPLLSS--------- 787
            ....||..          ||  ..:.|     ||..|...|::::      |.|.|         
pombe   626 AVSHTSMM----------HP--QEYGG-----SLPSSTVPSDYNQ------PQLVSPRAQADQQG 667

  Fly   788 -SHRSLG-----------TV-------DEDQHNSVDMSAVMVHDSLSSLV 818
             |::::|           ||       |....|...||.:.:..||.|::
pombe   668 LSYKNVGRAVLNGLVGLETVHMLTNPDDAGSSNRFSMSVLPISPSLHSIL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 8/39 (21%)
HLH 505..570 CDD:238036 25/74 (34%)
sre2NP_595229.1 HLH 427..496 CDD:278439 25/85 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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