DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mitf and Tfec

DIOPT Version :9

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:XP_006505098.1 Gene:Tfec / 21426 MGIID:1333760 Length:353 Species:Mus musculus


Alignment Length:453 Identity:131/453 - (28%)
Similarity:181/453 - (39%) Gaps:149/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 IQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAV 356
            |:.....|:.::..|.||.:..:.|.::                      .|....:...||..:
Mouse     6 IRSYPPMVQAHVETSTKPQLQKAQTQQV----------------------TPFMTFDCRVCDQTL 48

  Fly   357 S-----AKRIMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQL------ 410
            .     |...||..:..|:||  .|...|.. ||....:......||   |..|.:..:      
Mouse    49 KRAQPPAASCMPLAEHEPMSP--DSDAGCAG-NPFTNLLALGKKDGA---EKWHLSGSILDVYSD 107

  Fly   411 --GLSKANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQND 473
              |:|.||:.|                        |.|| .||:..:...::|.|.         
Mouse   108 EQGISSANAGL------------------------TDAP-CPSILPMRKEIAETDG--------- 138

  Fly   474 SFNFDKNFNSELSIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGS 538
                                      .||||:||||||||:||||||:|||.||||||||:||.:
Mouse   139 --------------------------RALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSN 177

  Fly   539 DAFYEVVRDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKS 603
            |.      |:|.|||||||:||||||.|:.|..|.|:.|.||:::|..||:|..||:|||:||::
Mouse   178 DP------DMRWNKGTILKASVDYIKWLQKEQQRARELEHRQKKLEHANRQLRLRIQELEIQARA 236

  Fly   604 HG--ILLS------ENHLTSLSAPTQPYLKS--FSLSPTASRS-----RRSLFDQPVE------- 646
            ||  ||.|      ..|:|......:..|..  ..|:||...|     :...|..|:.       
Mouse   237 HGLPILASLGTADVGTHITKQQTHPERNLGGCCLQLTPTQGTSPEFYEQAVAFSDPLSHFTDLSF 301

  Fly   647 ----KKIQVIDGADGNMGMNQVDEFMED--CKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSG 703
                |:.|.:||.           .:.|  |.:   |.||:||:.|...|...|.||.:...|
Mouse   302 SAALKEEQRLDGM-----------LLSDTICPF---GTDPLLSAISPAVSKASSRSSLSSEDG 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 5/18 (28%)
HLH 505..570 CDD:238036 44/64 (69%)
TfecXP_006505098.1 bHLHzip_MITF 135..238 CDD:381496 67/143 (47%)
DUF3371 232..336 CDD:371761 28/117 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847999
Domainoid 1 1.000 85 1.000 Domainoid score I8160
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I4416
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm43034
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X566
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.850

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