DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mitf and Tfeb

DIOPT Version :9

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_035679.3 Gene:Tfeb / 21425 MGIID:103270 Length:534 Species:Mus musculus


Alignment Length:567 Identity:168/567 - (29%)
Similarity:236/567 - (41%) Gaps:169/567 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LGDISIDETAEPRIVGLPPLSGGPTFKTATPTSRTQLKLQLQREQQQQ----MMIQQQTLDTAMD 206
            |.|...||    ..:||.||.......||...||..|::||.|||.||    ..:|||.:     
Mouse    34 LKDYEDDE----YFMGLSPLDYREPEPTAAMASRIGLRMQLMREQAQQEEQRERMQQQAV----- 89

  Fly   207 PKMHLLFGSGQGLMESEFIDSGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVPL--QSIG 269
              ||                               .|.|..|....:.......:..|:  || .
Mouse    90 --MH-------------------------------YMQQQQQQQQQLGGPPTPAINTPVHFQS-P 120

  Fly   270 VDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNS 334
            ..||.:||:|.:.|||||.||:.|.|..:||:||||::                           
Mouse   121 PPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETY--------------------------- 158

  Fly   335 SLQKGICDPLERTNRFGCDSAVSAKRIMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNS---- 395
                        .|:|       |..:.|:..:...:|.....||...:.........|||    
Mouse   159 ------------GNKF-------AAHVSPAQGSPKPAPAASPGVRAGHVLSTSAGNSAPNSPMAM 204

  Fly   396 -HGAGEPENAHRTAQLGLSKANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSV 459
             |.:..||.........:.:.:|.|........:.|::.:||:..::.|....::.|:..| ||.
Mouse   205 LHISSNPEKEFDDVIDNIMRLDSVLGYINPEMQMPNTLPLSSSHLNVYSGDPQVTASMVGV-TSS 268

  Fly   460 SEPDDIFDDILQNDSFNFDKNFNSELSIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNIN 524
            |.|.|                    |:.|:|   |||||..||||:||||||||:||||||||||
Mouse   269 SCPAD--------------------LTQKRE---LTDAESRALAKERQKKDNHNLIERRRRFNIN 310

  Fly   525 DRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRK 589
            |||||||.|:||.:|.      |:|.|||||||:|||||:.::.::.:.|:.|...|::|:.|::
Mouse   311 DRIKELGMLIPKANDL------DVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQ 369

  Fly   590 LMSRIKELEMQAKSHGILLSENHLTSLSAPTQPYLKSFSLSPTASRS---RRSLFDQPVEKKIQV 651
            |..||:||||||:.||:                        ||.|.|   ...|..|.|::::..
Mouse   370 LWLRIQELEMQARVHGL------------------------PTTSPSGVNMAELAQQVVKQELPS 410

  Fly   652 IDG-ADGNMGMNQVDEFMEDCKYAVQGGDPMLSSHSHMQSA--PQSP 695
            .|| .:..|...:|.|..:         .|.|...:.:.||  ||||
Mouse   411 EDGPGEALMLGPEVPEPEQ---------MPALPPQAPLPSAAQPQSP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 20/38 (53%)
HLH 505..570 CDD:238036 43/64 (67%)
TfebNP_035679.3 MITF_TFEB_C_3_N 63..219 CDD:292573 53/240 (22%)
HLH 291..351 CDD:238036 43/65 (66%)
DUF3371 379..531 CDD:288684 25/103 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847997
Domainoid 1 1.000 85 1.000 Domainoid score I8160
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I4416
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm43034
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 1 1.000 - - X566
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.890

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