DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mitf and tfe3a

DIOPT Version :9

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_571923.2 Gene:tfe3a / 114834 ZFINID:ZDB-GENE-010919-2 Length:539 Species:Danio rerio


Alignment Length:674 Identity:193/674 - (28%)
Similarity:278/674 - (41%) Gaps:214/674 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GEEPPTTSF-----ADNIDKACPLPVLRSSDCDCVPLCMTNIRVSVGIDKDLEMILEMDPSIVDL 146
            |.|.|.|.:     |::::.....|:|..|                ||..|:|:     .|:   
Zfish    23 GHERPQTVYVILDSAESVNLISVEPLLPES----------------GIVADIEV-----ESV--- 63

  Fly   147 GDISIDETAEPRIVGLPPLSGGPTFKTATP--------TSRTQLKLQLQREQ---QQQMMIQQQT 200
              .|.|..|...:.|.|....| :..:|.|        |||..::.:|.|:|   |::...|:| 
Zfish    64 --FSADSDAFYELKGQPITPSG-SLTSADPVTPTGSVMTSRVLMRQELMRQQAQDQERREAQKQ- 124

  Fly   201 LDTAMDPKMHLLFGSGQGLMESEFIDSGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVPL 265
                                                :||.:|        .|.||:....:...|
Zfish   125 ------------------------------------ASSAQQ--------RLTDSTPAISVASNL 145

  Fly   266 QSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGN 330
            .:....||.:||:|.|.|||||:||:.|.|:.||:|||          |||...|:|:.:.:|..
Zfish   146 PAKPTQVPVEVLKVQTHLENPTKYHIQQAQRQQVKQYL----------SHTLGNKIASQTLATSP 200

  Fly   331 LQNSSLQKGICDPLERTNRFGCDSAVSAKRIMPSDDAMPISP-----FGGSFVRCDDINPIEPTV 390
            ....|                     ||..:.|:..:.|.||     .|.:....:|:  |:..:
Zfish   201 PPQPS---------------------SAPELAPAASSTPSSPLAVLSLGSNKEEIEDV--IDDII 242

  Fly   391 LRPNSHGAGEPENAHRTAQLGLSKANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSV 455
                     ..|::.....:.|..:...|.||...||  |.:.:.|:    |..:||      ::
Zfish   243 ---------SLESSLNDEFMTLIDSGLQLPSTLPVSG--NLLDVYSS----QGMAAP------TI 286

  Fly   456 ATSVSEPDDIFDDILQNDSFNFDKNFNSELSIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRR 520
            ..|.|.|.|     |||              :|:|   ::|||..|:.|:||||||||:||||||
Zfish   287 TVSNSCPAD-----LQN--------------VKRE---MSDAEAKAIMKERQKKDNHNLIERRRR 329

  Fly   521 FNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVEL 585
            ||.||||||||.|:||.||.      ::|.|||||||:|||||:.|:.|..|.::.|.||:::|.
Zfish   330 FNTNDRIKELGALIPKSSDP------ELRWNKGTILKASVDYIRKLQKEQQRSKEMETRQKKLEH 388

  Fly   586 QNRKLMSRIKELEMQAKSHG---------------ILLSENHLTSLS----APTQPYLKSFSLSP 631
            .||.||.||:||||||:.||               :.|..|..|.||    :.||....||...|
Zfish   389 ANRSLMLRIQELEMQARLHGLSSSQLSDSLTQTQTLTLEHNPNTDLSKTLLSITQTTPSSFLSPP 453

  Fly   632 TASRSRRSLFDQPVEKKIQVIDGAD------------GNMGMNQVDEFMED--CKYAVQGGDPML 682
            :::.|.......|:|.........|            .:||:.  |..|:|  ....|.|.||:|
Zfish   454 SSTSSVGGTVTSPLELGTLSFGELDDHTASVFSPALMADMGLG--DILMDDSGALSPVGGADPLL 516

  Fly   683 SSHSHMQSAPQSPSSKTLNSGSFE 706
            |:    .|...|.:|...:|.|.|
Zfish   517 SA----VSPGASKTSSRRSSFSME 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 20/38 (53%)
HLH 505..570 CDD:238036 43/64 (67%)
tfe3aNP_571923.2 MITF_TFEB_C_3_N 101..238 CDD:292573 49/214 (23%)
HLH 314..374 CDD:238036 44/65 (68%)
DUF3371 402..538 CDD:288684 36/141 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593390
Domainoid 1 1.000 85 1.000 Domainoid score I8110
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4340
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm24979
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X566
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.000

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