DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34057 and Rfng

DIOPT Version :10

Sequence 1:NP_001033980.2 Gene:CG34057 / 3885645 FlyBaseID:FBgn0054057 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_008766703.1 Gene:Rfng / 60433 RGDID:621322 Length:353 Species:Rattus norvegicus


Alignment Length:172 Identity:42/172 - (24%)
Similarity:66/172 - (38%) Gaps:44/172 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ILCLVLTMPSSHATKAALVNRTWGARCNKLIFM-SSQTDSNLNIL----QINKSESRKNLYAKVR 141
            :...|.|...:|..:..|:.|||.:|..:..|: :...|..|.:|    .||.:.|      .||
  Rat    63 VFIAVKTTRKNHGPRLRLLLRTWISRAPRQTFIFTDGDDPELQLLAGSQMINTNCS------AVR 121

  Fly   142 TGMAYVHKHYLNEYD--------WFLKADDDTYIVMENLRLFLYPYDPESSVYFG---------- 188
            |..|...|..: |||        ||...|||.|:..::|...|..:.....:|.|          
  Rat   122 TRQALCCKMSV-EYDKFIESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIEA 185

  Fly   189 ----------CRFKAYFSQGYMSGGGGYVLSRDALRRLNLFA 220
                      ...|.:|:    :||.|:.|||....:::.:|
  Rat   186 TERVQGGGTSNTVKFWFA----TGGAGFCLSRGLALKMSPWA 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34057NP_001033980.2 Galactosyl_T 93..>243 CDD:473923 40/161 (25%)
RfngXP_008766703.1 Fringe 58..327 CDD:367085 42/172 (24%)

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