DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34057 and fng

DIOPT Version :10

Sequence 1:NP_001033980.2 Gene:CG34057 / 3885645 FlyBaseID:FBgn0054057 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster


Alignment Length:222 Identity:50/222 - (22%)
Similarity:70/222 - (31%) Gaps:85/222 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NDLRASEKAALLKYPVASEEHLATWLRREVR--------------------------ILCLVLTM 89
            :|:..||:      |.|:   |.|.|.|..|                          |...|.|.
  Fly   102 SDIEVSER------PTAT---LLTELARRSRNGELLRDLSQRAVTATPQPPVTELDDIFISVKTT 157

  Fly    90 PSSHATKAALVNRTWG--ARCNKLIFMSS-------QTDSNLNILQINKSESRKNLYAKVRTGMA 145
            .:.|.|:.||:.:||.  ||.....|..:       :|..:|...:.::...||.|..|:..   
  Fly   158 KNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSA--- 219

  Fly   146 YVHKHYLNEYD--------WFLKADDDTYIVMENLRLFLYPYDPESSVYFGCRFKAYFSQ----- 197
                    |.|        ||...|||.|:.:..|...|..|.|....|.|   |...|.     
  Fly   220 --------ELDVFLESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLG---KPSISSPLEIH 273

  Fly   198 --------------GYMSGGGGYVLSR 210
                          .:.:||.|:.|||
  Fly   274 LDSKNTTTNKKITFWFATGGAGFCLSR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34057NP_001033980.2 Galactosyl_T 93..>243 CDD:473923 37/154 (24%)
fngNP_524191.1 Fringe 145..394 CDD:367085 40/170 (24%)

Return to query results.
Submit another query.