DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34057 and LOC100486323

DIOPT Version :9

Sequence 1:NP_001033980.2 Gene:CG34057 / 3885645 FlyBaseID:FBgn0054057 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_017947371.2 Gene:LOC100486323 / 100486323 -ID:- Length:327 Species:Xenopus tropicalis


Alignment Length:312 Identity:109/312 - (34%)
Similarity:169/312 - (54%) Gaps:30/312 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FLVLGIMLGIRLTDFI--------GYLKL-----WRNNDLRASEKAALLKYPVASEEHLATWLRR 78
            :..||:.:|...|.::        .:.||     |.|.:|..           .|:..::..|.:
 Frog    12 YFSLGLTVGFFFTLYMTNNASMVDKWQKLSRSWKWNNENLTQ-----------ISDNKVSENLSK 65

  Fly    79 EVRILCLVLTMPSSHATKAALVNRTWGARCNKLIFMSSQTDSNLNILQINKSESRKNLYAKVRTG 143
            .||:||.::|.|::..:||..:.|:|...||..:||||..:.....:.:...|.|:.||.|....
 Frog    66 SVRVLCWIMTSPNNLQSKAIHLKRSWTRHCNITLFMSSTANETFPTIGLGTKEGREELYWKTIRA 130

  Fly   144 MAYVHKHYLNEYDWFLKADDDTYIVMENLRLFLYPYDPESSVYFGCRFKAYFSQGYMSGGGGYVL 208
            ..|:|::||::.||||||||||::|||||:..|..|.||..:|.|.|||.:.:|||||||.||||
 Frog   131 FQYIHQNYLDQADWFLKADDDTFVVMENLQFLLSNYTPEQPIYLGKRFKPFVNQGYMSGGAGYVL 195

  Fly   209 SRDALRR-LNLFALNSTTICKLNGESEDVQIGHCLQDVGVIAGDTRDFQGHHRFLPVNPFT-VFP 271
            |:::|:| :..|   .|.:|......||:.:|.|::.:|||.||:||.:....|.|..|.| :..
 Frog   196 SKESLKRFVEAF---RTGVCTHTSSIEDLALGQCMEKLGVIPGDSRDSEKRETFHPFTPETHIIT 257

  Fly   272 TILSNSWLEGYFFHKPNKS-DCCAASAISFHYVKDFEFELFEFFLYYMRVFG 322
            ...::|...||.::...:. .||:..|||||||........|:|:|::|.:|
 Frog   258 RYTADSIYWGYCYYPLIQGPQCCSDLAISFHYVPPELMYTLEYFVYHLRAYG 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34057NP_001033980.2 Galactosyl_T 93..>243 CDD:304462 64/150 (43%)
LOC100486323XP_017947371.2 Galactosyl_T 87..>232 CDD:419759 62/147 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D555141at33208
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.