DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and CRISPLD2

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_113664.1 Gene:CRISPLD2 / 83716 HGNCID:25248 Length:497 Species:Homo sapiens


Alignment Length:375 Identity:80/375 - (21%)
Similarity:124/375 - (33%) Gaps:134/375 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GPCVATGLLLLFGLNLVFLLPE--------TNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPK 60
            |..:..|||.|...:..:|||.        :.|.|               |.|.|...:.     
Human     6 GGVIPLGLLFLVCGSQGYLLPNVTLLEELLSKYQH---------------NESHSRVRRA----- 50

  Fly    61 IIDVPKHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRC--DLQPTD 123
               :|:..|:.||..||..|     ||:.  |.|:.|..:.||.||...|.....:|  :..||.
Human    51 ---IPREDKEEILMLHNKLR-----GQVQ--PQASNMEYMTWDDELEKSAAAWASQCIWEHGPTS 105

  Fly   124 HCISTEE--------FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQ-----YKHVSSSSLIDG 175
            ..:|..:        :.||.:|                   :.:|||:     |.:.|..:....
Human   106 LLVSIGQNLGAHWGRYRSPGFH-------------------VQSWYDEVKDYTYPYPSECNPWCP 151

  Fly   176 LSTAKKEIGHFLRMIVGPSNRLGCAIASIEK-GGWTHQW-----LACLYSC-------SPQKNSL 227
            ...:.....|:.:::...:|::|||:.:..| ..|...|     ..|.||.       :|.||  
Human   152 ERCSGPMCTHYTQIVWATTNKIGCAVNTCRKMTVWGEVWENAVYFVCNYSPKGNWIGEAPYKN-- 214

  Fly   228 LYEYSGKPGVYCTTGINGKFQ-NLCN-----------------DTEPVKDCMH----------SE 264
                 |:|...|.....|..: |||.                 :|.|:.:..|          ::
Human   215 -----GRPCSECPPSYGGSCRNNLCYREETYTPKPETDEMNEVETAPIPEENHVWLQPRVMRPTK 274

  Fly   265 LFQTITANDTTSLIR-----------SMLNRQTQPRTFGWLWNWGKKIWG 303
            ..:|...|..|.::|           |..||...|.  |.| |...||:|
Human   275 PKKTSAVNYMTQVVRCDTKMKDRCKGSTCNRYQCPA--GCL-NHKAKIFG 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 37/170 (22%)
CRISPLD2NP_113664.1 SCP_euk 56..201 CDD:240180 37/170 (22%)
LCCL 286..370 CDD:128866 11/39 (28%)
LCCL 387..479 CDD:128866
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151107
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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