DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and AT4G25780

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_194308.1 Gene:AT4G25780 / 828683 AraportID:AT4G25780 Length:190 Species:Arabidopsis thaliana


Alignment Length:251 Identity:57/251 - (22%)
Similarity:82/251 - (32%) Gaps:96/251 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLFGLNLVFLLPETNYCHLKN-------------CPADKKLPHIGCNNSGSWSPKCGKDPKII 62
            :|||..||:|..|..||....|:             ||        ||:                
plant     9 ILLLGALNVVVSLSITNSLITKSATLGQVFRICKNLCP--------GCD---------------- 49

  Fly    63 DVPKHIKKLILNHHNTYRDIVAGGQMHRLPIAARM-LKLKWDHELALLATILVKR----CDLQPT 122
                |.....|..||..|             |||. ..|.||..|...|.....:    |.|:  
plant    50 ----HDSLQFLFRHNLVR-------------AARFEPPLIWDRRLQNYAQGWANQRRGDCALR-- 95

  Fly   123 DHCISTEEFSSP-----SYHAVYNKFKAKEDTFRIVRSQLNAWYDQ--YKHVSSSSLIDGLSTAK 180
             |.:|..||:..     .|.|.::...|           :.||..:  :.|..|::     ..|.
plant    96 -HSVSNGEFNLGENIYWGYGANWSPADA-----------VVAWASEKRFYHYGSNT-----CDAG 143

  Fly   181 KEIGHFLRMIVGPSNRLGCAIASIEKGGWTHQWLACLYSCSPQKNSLLYEYSG-KP 235
            :..||:.:::...:.|:|||....:.||   .::.|.|  .|..|     |.| ||
plant   144 QMCGHYTQIVWKSTRRVGCARVVCDNGG---IFMTCNY--DPPGN-----YIGQKP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 35/161 (22%)
AT4G25780NP_194308.1 CAP_PR-1 54..190 CDD:349400 42/178 (24%)

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