DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and AT2G19980

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_179588.1 Gene:AT2G19980 / 816517 AraportID:AT2G19980 Length:165 Species:Arabidopsis thaliana


Alignment Length:165 Identity:28/165 - (16%)
Similarity:52/165 - (31%) Gaps:67/165 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LALLATILV---------KRCDLQPTDHCISTEEFSSPSYHAVYNKFKAKE-------DTFRIVR 154
            |.||:.:|.         :..||||.:..            ||:|:.:|.:       ..:..||
plant    11 LTLLSIVLTQIYGLRSFSRMDDLQPAETL------------AVHNQIRAADQKLAAHAQRYANVR 63

  Fly   155 SQ--------------------------------LNAWYDQYKHVSSSSLIDGLSTAKKEIGHFL 187
            ||                                ...|:.:..:.:.::     :...:..||:.
plant    64 SQDCAMKYSTDGTYGENIAAGWVQPMDTMSGPIATKFWFTEKPYYNYAT-----NKCSEPCGHYT 123

  Fly   188 RMIVGPSNRLGCAIASIEKGGWTHQWLACLYSCSP 222
            :::...|..|||......|..:.  |:.|.|:..|
plant   124 QIVANQSTHLGCGTVRCFKNEYV--WVVCNYAPRP 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 26/160 (16%)
AT2G19980NP_179588.1 SCP 35..165 CDD:294090 21/141 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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