DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Glipr2

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_006238202.1 Gene:Glipr2 / 679819 RGDID:1583669 Length:170 Species:Rattus norvegicus


Alignment Length:145 Identity:32/145 - (22%)
Similarity:51/145 - (35%) Gaps:29/145 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWD---HELALLATILVKRCDLQPTDHCIS 127
            |.....:|..||.||      ..|.:|......||..:   :..||.:|.::|.........|  
  Rat    23 KQFNNEVLKAHNEYR------AKHGVPPLKLCKKLNQEAQQYSEALASTRILKHSPESSRGQC-- 79

  Fly   128 TEEFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIGHFLRMIVG 192
            .|..:..||          :.|.:.|..:   ||.:.|..:...  .|.::.   .|||..|:..
  Rat    80 GENLAWASY----------DQTGKEVADR---WYSEIKSYNFQQ--PGFTSG---TGHFTAMVWK 126

  Fly   193 PSNRLGCAIASIEKG 207
            .:.::|...||...|
  Rat   127 NTKKIGVGKASASDG 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 31/142 (22%)
Glipr2XP_006238202.1 SCP_GAPR-1_like 24..155 CDD:240182 31/144 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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