DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and CG42564

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster


Alignment Length:332 Identity:91/332 - (27%)
Similarity:143/332 - (43%) Gaps:49/332 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LPETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKKLILNHHNTYRDIVAGGQ 87
            ||:  ||....|  .|:|.|:.||.|.....||..|.::|.:...:::.:|...|..||.||.|.
  Fly    52 LPD--YCDPSLC--HKELKHVACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGG 112

  Fly    88 MHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEFS-----SPSYHAVYNKFKAKE 147
            .:.|..|:||..|||:.|||.||...|:.|.|: .|.|.:| :|:     :..|..:..|....|
  Fly   113 FNGLSPASRMGTLKWNPELAYLAEFNVRDCVLR-HDECRNT-KFTQNAGQTVGYRGIKGKLPELE 175

  Fly   148 DTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIG----HFLRMIVGPSNRLGCAIASIEKGG 208
            |   |:|..:..|   .:..|.:|:::.:...::|..    :||::::..:..:||||....:.|
  Fly   176 D---ILRDIIGVW---LREKSRTSMVNIMKYVEQESQSPKYNFLQIVLENAESVGCAIVQQSRHG 234

  Fly   209 WTHQWLACLYSCSPQKNSLLYEYSGKPGVYCTTGINGKFQNLCNDTEPVKDCMHSELFQTITAND 273
            |...:.||.|..:|...|.:||...|....|.||.|.|:.:||.:         ||:::.:|...
  Fly   235 WIQTFFACNYGHAPVVGSPVYEPGKKAAESCKTGANPKYAHLCAE---------SEVYEKVTPKA 290

  Fly   274 TTSLIRSMLNRQTQPRTFGWLWNWGKKIWGWVKNAWNAIVGCGKGGGGGGGDGGGGGGGDDGGEG 338
            ..:....:..|....|.|..|            |..||       .|....:||......||...
  Fly   291 GNASSPEIKTRTLGKRDFVML------------NGENA-------DGTPPAEGGAPAPAADGAAA 336

  Fly   339 DDGGDGG 345
            ....:||
  Fly   337 APAAEGG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 46/158 (29%)
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 46/157 (29%)

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