DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and glipr1b

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_005159058.1 Gene:glipr1b / 393547 ZFINID:ZDB-GENE-040426-1459 Length:255 Species:Danio rerio


Alignment Length:218 Identity:45/218 - (20%)
Similarity:75/218 - (34%) Gaps:62/218 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IDVPKHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKL--------KWDHELALLATILVKRCD 118
            |..|:.|::.: ..|||:|..|:       |.||....:        .||.|||..|....:.| 
Zfish    28 ITEPEFIRRCV-KAHNTHRARVS-------PPAAGARSMVRQVFGMQSWDKELAKGARDRARHC- 83

  Fly   119 LQPTDHCISTEEFSSPSY---------HAVYNKFKAKEDTFRIVRSQLNAWYDQ----YKHVSSS 170
              ...|..|...|..|.:         .:.::.|.        |.:.::.|..:    .|:.:.|
Zfish    84 --KGSHYPSLGHFGHPLFGWMGENIWLGSPFSAFS--------VENAVHRWSKEGAYSVKNNNCS 138

  Fly   171 SLIDGLSTAKKEIGHFLRMIVGPSNRLGCAIASIEKGGWTHQWLACLYSCSPQKNSLLYEYSGKP 235
            .|          .||:.:::...|.::|||:....||...       :|..|:....:..|....
Zfish   139 RL----------CGHYAQLMWSTSFKMGCAVNVCSKGIEN-------FSTHPESTIFVCNYGDTG 186

  Fly   236 GV-----YCTTGINGKFQNLCND 253
            .|     |...|.:|....:|.|
Zfish   187 QVHGVTPYMAMGCSGCGSEICRD 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 33/170 (19%)
glipr1bXP_005159058.1 SCP 32..185 CDD:294090 37/188 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585645
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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