DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and crispld1b

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_009296842.1 Gene:crispld1b / 393442 ZFINID:ZDB-GENE-040426-1204 Length:509 Species:Danio rerio


Alignment Length:417 Identity:83/417 - (19%)
Similarity:127/417 - (30%) Gaps:164/417 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TGLLLLFGLNLVFLLPETNYCHLKNCPADKKLPHIGCNNSGSW--SPKCGKDPKIIDVPKHIKKL 71
            :|.:||..:..|..:...|..||: ...:|.:     :...:|  |...||..    :.:...:|
Zfish    11 SGFVLLVTVQTVVSMVIPNATHLE-AILEKYM-----DKDETWWQSKSRGKRA----ISQSDMQL 65

  Fly    72 ILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRC------------------- 117
            ||:.||..|     ||::  |.|:.|..:.||.||...|......|                   
Zfish    66 ILDLHNKLR-----GQVY--PPASNMEYMVWDTELERSAEHWAHTCLWEHGPSHLLTRIGQNLGA 123

  Fly   118 ----DLQPTDHCISTEEFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVS---------- 168
                |..||.|                                :.||||:.:..|          
Zfish   124 HWGRDRPPTFH--------------------------------VQAWYDEVRDFSYPYPQECNPH 156

  Fly   169 -----SSSLIDGLSTAKKEIGHFLRMIVGPSNRLGCAI-ASIEKGGWTHQW-----LACLYS--- 219
                 |..:..          |:.:::...||::|||| .......|...|     |.|.||   
Zfish   157 CPYRCSGPVCT----------HYTQLVWATSNKIGCAINVCYNMNVWGMIWAKAVYLVCNYSPPG 211

  Fly   220 ----------------CSPQ-----KNSLLYEYSGKPGVYC-TTGINGKFQNLCNDTEPVKDCMH 262
                            |.|.     :|:|.|:..|....|. .|..|...:   .:.|||:.  |
Zfish   212 NWWGHAPYKHGTPCSACPPSYGGGCRNNLCYKDDGSNYHYTPETEENNYIE---PEPEPVRS--H 271

  Fly   263 SELF----------QTITANDTTSLIR-----------------SMLNRQTQPRTFGWLWNWGKK 300
            ...:          :.|..|:.:|..:                 :..||...|.  |..:|:||.
Zfish   272 DTHYRDETTTPSPNENIERNEVSSTSQMSQQVACDTRLRDQCKGTTCNRYECPP--GCFYNYGKV 334

  Fly   301 IWGWVKNAWNAIVGCGKGGGGGGGDGG 327
            |.....:..::|.|.|...|....|||
Zfish   335 IGSGHYDMQSSICGSGLHAGIIDDDGG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 38/193 (20%)
crispld1bXP_009296842.1 SCP_euk 64..208 CDD:240180 38/192 (20%)
LCCL 301..385 CDD:128866 15/63 (24%)
LCCL 404..501 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585651
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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