DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34002 and Crisp2

DIOPT Version :9

Sequence 1:	NP_001034029.2	Gene:	CG34002 / 3885644	FlyBaseID:	FBgn0054002	Length:	350	Species:	Drosophila melanogaster
Sequence 2:	NP_001011710.1	Gene:	Crisp2 / 360445	RGDID:	621653	Length:	243	Species:	Rattus norvegicus

Alignment Length:	236	Identity:	50/236 - (21%)
Similarity:	97/236 - (41%)	Gaps:	49/236 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    53 PKCGKDPKIIDVPKH---IKKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILV 114
            |..||||....:..:   :::.|:..||..|..|:       |..:.:||::|:.:.|..|....
  Rat    19 PTEGKDPDFATLTTNQIQVQREIIAKHNELRRQVS-------PPGSNILKMEWNVQAAANAQKWA 76

  Fly   115 KRCDLQPTDHCISTEEFSSPSYHAVYNKFKAKEDTFRIV-----RSQLNAWYDQYKHVSSSSLID 174
            ..|.|:.:    |||:...        ..|..|:.:...     |:.:.:||::     :.:.:.
  Rat    77 NNCILEHS----STEDRKI--------NIKCGENLYMSTDPTSWRTVIQSWYEE-----NENFVF 124

  Fly   175 GL-STAKKEIGHFLRMIVGPSNRLGCAIASIEKGGWTHQWLACLYSCSPQKNSLLYE----YSGK 234
            |: :.....:||:.:::...|.::||.:|..........:..|.| | |..|:::.:    :.|.
  Rat   125 GVGAKPNSAVGHYTQLVWYSSFKVGCGVAYCPNQDTLKYFYVCHY-C-PMGNNVMKKSTPYHQGT 187

  Fly   235 PGVYCTTGI-NG------KFQNLCNDTEPVKD---CMHSEL 265
            |...|.... ||      .|::|.::.|.:|.   |.|..|
  Rat   188 PCASCPNNCDNGLCTNSCDFEDLLSNCESLKSSAGCKHELL 228

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34002	NP_001034029.2	SCP_euk	69..219	CDD:240180	29/155 (19%)
Crisp2	NP_001011710.1	CAP_CRISP	36..172	CDD:349402	31/161 (19%)
Crisp2	NP_001011710.1	Crisp	189..243	CDD:400739	10/40 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166344587
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.750