DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34002 and Clec18a

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:236 Identity:56/236 - (23%)
Similarity:88/236 - (37%) Gaps:46/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SWS----PKCGKDPKIIDVPKHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLA 110
            :|:    |:..:||.:..:.:....|||..||..|     .::|  |.||.|.::.|...||.||
Mouse   104 TWTEVQPPQPKQDPTLQALSRKESFLILTAHNRLR-----SRVH--PPAANMQRMDWSESLAQLA 161

  Fly   111 TILVKRCDLQPTDHCISTEEFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYD---QYKHVSSSSL 172
            ......|....|.:..||...:|   |..:|.......:...| ..:|.|:.   ||:|.     
Mouse   162 EARAALCVTSVTPNLASTPGHNS---HVGWNVQLMPMGSASFV-EVVNLWFAEGLQYRHG----- 217

  Fly   173 IDGLSTAKKEIGHFLRMIVGPSNRLGCAIASIEKGGWTHQWLACLYSCSPQKNSLLYEYSG---- 233
             |..........|:.:::...|::|||............:...|.|  ||..|   ::.:|    
Mouse   218 -DAECAHNATCAHYTQLVWATSSQLGCGRQPCFVDQEAMEAFVCAY--SPGGN---WDINGKTVA 276

  Fly   234 --KPGVY---CTTGINGKFQ------NLCNDTEPVKDCMHS 263
              |.|.:   ||..::|.|:      .||.  .|...|..|
Mouse   277 PYKKGTWCSLCTARVSGCFKAWDHAGGLCE--VPRNPCRMS 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 36/152 (24%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 37/152 (24%)
EGF_Lam 315..360 CDD:214543 1/1 (100%)
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.