DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and glipr2

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_021327299.1 Gene:glipr2 / 325699 ZFINID:ZDB-GENE-030131-4424 Length:543 Species:Danio rerio


Alignment Length:217 Identity:50/217 - (23%)
Similarity:77/217 - (35%) Gaps:59/217 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NLVFL----LPETNYCHL----KN-CPADKKL-------PHIG---CNNSGSWSPKCGKDPKIID 63
            |.:|:    ||..|..:.    || .|...||       .|.|   ..:||..|.|....|.|.:
Zfish   121 NTIFVVGQYLPAGNIANAGYFEKNVLPTGSKLDQKPTGATHKGEQAHGSSGIHSNKVPSVPHIAE 185

  Fly    64 VP-------KHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKL-----KWDHELALLATILVKR 116
            .|       ...:...|..||.||      :.|..|.....:.|     ||...|....|::   
Zfish   186 KPTPEGKADSSFEAEFLQTHNAYR------KHHGAPPLTININLSRSAQKWAEHLLSTRTLM--- 241

  Fly   117 CDLQPTDHCISTEEFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKK 181
                   |  |..::....|:| |:....|    ...|..:.:||::.|..:.|.  .|.::   
Zfish   242 -------H--SNGDYGENVYYA-YSSANKK----LTGREAVESWYNEIKEYNFSR--PGFTS--- 287

  Fly   182 EIGHFLRMIVGPSNRLGCAIAS 203
            :.|||.:::...|..||..:|:
Zfish   288 KTGHFTQVVWKDSKELGVGLAT 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 31/140 (22%)
glipr2XP_021327299.1 SCP_GAPR-1_like 5..135 CDD:240182 4/13 (31%)
SCP_GAPR-1_like 196..326 CDD:240182 31/142 (22%)
SCP_GAPR-1_like 397..528 CDD:240182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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