DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and glipr2

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001410593.1 Gene:glipr2 / 325699 ZFINID:ZDB-GENE-030131-4424 Length:543 Species:Danio rerio


Alignment Length:194 Identity:45/194 - (23%)
Similarity:71/194 - (36%) Gaps:41/194 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLPETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVP-------KHIKKLILNHHNTY 79
            :||..:....|:..|..|:.. ...:||..|.|....|.|.:.|       ...:...|..||.|
Zfish   145 VLPTGSKLDQKSTGATHKVEQ-AHGSSGIHSNKVPSVPHIAEKPTPEGKAESSFEAEFLQTHNAY 208

  Fly    80 RDIVAGGQMHRLPIAARMLKL-----KWDHELALLATILVKRCDLQPTDHCISTEEFSSPSYHAV 139
            |      :.|..|.....:.|     ||...|..:.|::          |  |..:.....|:| 
Zfish   209 R------KHHGAPPLTININLSRSAQKWAEHLLSIRTLM----------H--SNGDHGENVYYA- 254

  Fly   140 YNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIGHFLRMIVGPSNRLGCAIAS 203
            ||....|    ...|..:.:||::.|..:.|.  .|.|:   :.|||.:::...|..||..:|:
Zfish   255 YNSANKK----LTGREAVESWYNEIKEYNFSR--PGFSS---KTGHFTQVVWKDSKELGVGLAT 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 33/140 (24%)
glipr2NP_001410593.1 CAP_GAPR1-like 5..135 CDD:349401
CAP_GAPR1-like 196..326 CDD:349401 33/142 (23%)
PRK09926 293..>399 CDD:236634 4/17 (24%)
CAP_GAPR1-like 397..528 CDD:349401
Blue background indicates that the domain is not in the aligned region.

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