DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34002 and CG9400

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster


Alignment Length:233 Identity:73/233 - (31%)
Similarity:118/233 - (50%) Gaps:15/233 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKKLILNHHNTYRDIVAGGQMHRLPI 93
            |.|.|......:||..|.|:||:||.||.:||::::.:..::|:|:.||..|..:|.|.:.....
  Fly    56 CELYNGTHLVHVPHTACGNNGSFSPACGPEPKLLEMSERRRQLLLDMHNLARSKIASGNLDGYRS 120

  Fly    94 AARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEF----SSPSYHAVYNKFKAKEDTFRIVR 154
            ||.|..|:||.||..:|.:..|||.. ..|.|.:|..|    .:..|..:..:||:..   |.::
  Fly   121 AAHMPLLRWDTELEQMAALHAKRCQF-AHDKCRNTPRFKFSGQNIGYFWIGREFKSHS---RRMK 181

  Fly   155 SQLNAWYDQYKHVSSSSLIDGL--STAKKEIGHFLRMIVGPSNRLGCA-IASIEKGGWTHQW-LA 215
            |.:..|:.:::. ::.|.||..  ....|:||||..::....||:||| :..:|......|: |.
  Fly   182 SFVINWFREHQD-ANQSFIDRYHPHPQGKKIGHFTLLVSDRVNRVGCAGVRFLEPKSNRFQFMLT 245

  Fly   216 CLYSCSPQKNSLLYEYSGKPGVYCTT-GINGKFQNLCN 252
            |.|..:...|..:|: ||..|..|.. .|:.||.:||:
  Fly   246 CNYDYNNIFNEPIYQ-SGPAGSKCPQHRISEKFPSLCD 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 46/157 (29%)
CG9400NP_572957.1 CAP_euk 96..249 CDD:349399 46/157 (29%)

Return to query results.
Submit another query.