DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Crispld1

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:207 Identity:50/207 - (24%)
Similarity:73/207 - (35%) Gaps:58/207 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRC--DLQPTDHCISTEE---- 130
            ||:.||..|..|       .|.|:.|..:.||.||...|....:.|  :..||....|..:    
  Rat    65 ILDLHNKLRSQV-------YPAASNMEYMTWDVELERSAESWAETCLWEHGPTSLLPSIGQNLGA 122

  Fly   131 ----FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQ-------YKHVSSSSLIDGLSTAKKEIG 184
                :..|::|                   :.||||:       |:|......  ....:.....
  Rat   123 HWGRYRPPTFH-------------------VQAWYDEVRDFSYPYEHECDPYC--PFRCSGPVCT 166

  Fly   185 HFLRMIVGPSNRLGCAIASIEKGG-WTHQW-----LACLYSCSPQKN---SLLYEYSGKPGVYCT 240
            |:.:::...|:|:||||....... |...|     |.|.|  ||:.|   ...|:: |||...|.
  Rat   167 HYTQVVWATSSRIGCAINLCHNMNIWGQIWPKAVYLVCNY--SPKGNWWGHAPYKH-GKPCSACP 228

  Fly   241 TGINGKF-QNLC 251
            ....|.. :|||
  Rat   229 PSFGGGCRENLC 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 37/169 (22%)
Crispld1NP_001128435.1 CAP_CRISPLD1 62..207 CDD:349407 38/171 (22%)
LCCL 291..375 CDD:128866
LCCL 394..491 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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