DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Clec18a

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_038954172.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:297 Identity:65/297 - (21%)
Similarity:96/297 - (32%) Gaps:115/297 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLLLLFGLNLVFLLPETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKK---- 70
            |||||.                        ||.:|...:....|:.   ||.:.:.:.:.:    
  Rat    39 GLLLLL------------------------LPLLGITWTEVQPPQL---PKQVPIVQALSRKESF 76

  Fly    71 LILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEE----- 130
            |||..||..|     .|:|  |.||.|.::.|...||.||......|....|.:..:|..     
  Rat    77 LILTTHNRLR-----SQVH--PSAANMQRMDWSESLAQLAQARAALCGTSATPNLAATLRNTPDV 134

  Fly   131 --------FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYD---QYKHVSSSSLIDGLSTAKKEIG 184
                    ..|.|:..|                 :|.|:.   ||:|.|:.      ........
  Rat   135 GWNVQLLPMGSASFVEV-----------------VNVWFAEGLQYRHGSAE------CAHNATCA 176

  Fly   185 HFLRMIVGPSNRLGCAIASIEKGGW--------THQWLACLYSCSPQKNSLLYEYSG------KP 235
            |:.:::...|::|||        ||        ..:...|.|  ||..|   :|.:|      |.
  Rat   177 HYTQLVWATSSQLGC--------GWQPCFVDQVATEAFVCAY--SPGGN---WEINGKMIAPYKK 228

  Fly   236 GVY---CTTGINGKFQ------NLCNDTEPVKDCMHS 263
            |.:   ||..::|.|:      .||.  .|...|..|
  Rat   229 GPWCSLCTASVSGCFKAWDHAGGLCE--VPRNPCRMS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 37/177 (21%)
Clec18aXP_038954172.1 CAP_euk 77..211 CDD:349399 38/173 (22%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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