DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Pi15

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001100387.1 Gene:Pi15 / 301489 RGDID:1309577 Length:258 Species:Rattus norvegicus


Alignment Length:297 Identity:71/297 - (23%)
Similarity:102/297 - (34%) Gaps:80/297 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLFGLNLVFLLP---ETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKK-- 70
            ::::..:|||.||.   |.....|.|. .|..||   .||..............:|:||..:|  
  Rat     1 MVMISAVNLVILLSLLCEARTIVLLNF-TDSSLP---ANNFSDIEATLSVPVLSVDIPKARRKRY 61

  Fly    71 -------LILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCIST 128
                   .||::||..|..|       .|.||.|..:.||..||..|......|   ..||    
  Rat    62 ISQNDMIAILDYHNQVRGKV-------FPPAANMEYMVWDENLAKSAEAWAATC---IWDH---- 112

  Fly   129 EEFSSPSY--HAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVS-----------SSSLIDGLSTAK 180
                .|||  ..:......:...:|.:...:..|||:.|..:           .......:.|  
  Rat   113 ----GPSYLLRFLGQNLSVRTGRYRSILQLVKPWYDEVKDYAFPYPQDCNPRCPMRCFGPMCT-- 171

  Fly   181 KEIGHFLRMIVGPSNRLGCAIASIEK-GGWTHQW-----LACLYSCSPQKNSLLYEYSGKPGVYC 239
                |:.:|:...|||:||||.:.:. ..|...|     |.|.|:   .|.:.:.|...|.||.|
  Rat   172 ----HYTQMVWATSNRIGCAIHTCQNMNVWGSVWRRAVYLVCNYA---PKGNWIGEAPYKVGVPC 229

  Fly   240 TT---GINGK-FQNLCNDTEPVKDCMHSELFQTITAN 272
            ::   ...|. ..|||              |..:|.|
  Rat   230 SSCPPSYGGACTDNLC--------------FPGVTTN 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 41/177 (23%)
Pi15NP_001100387.1 SCP_euk 69..212 CDD:240180 40/166 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344579
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5171
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.800

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