DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Glipr1

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001011987.1 Gene:Glipr1 / 299783 RGDID:1305978 Length:251 Species:Rattus norvegicus


Alignment Length:214 Identity:51/214 - (23%)
Similarity:82/214 - (38%) Gaps:45/214 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 HNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEFSSPSYHA-V 139
            ||.:|.       ...|.|..||.:.||.:||.:|....:.|..|           .:|..|: :
  Rat    41 HNHFRS-------KAYPPAGNMLYMSWDPKLAQIAKAWAQSCVFQ-----------HNPQLHSRI 87

  Fly   140 YNKFKAKEDTFRI-------VRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIGHFLRMIVGPSNRL 197
            :..|....:...:       ||:.:.||:::.::...|:     ...||..||:.:::...|.::
  Rat    88 HPNFTGLGENIWLGSLSLFSVRAAILAWFEESQYYDFST-----GKCKKVCGHYTQIVWADSYKI 147

  Fly   198 GCAIASIEKGGWTHQWLACLYSCSPQKNSLLYEYSGKPGVYCTTGINGK--FQNLCNDTEPVKD- 259
            |||:....:|.    ...|.|  .|..|...:.|  |.|..|:......  ..|||  |.|.:| 
  Rat   148 GCAVQLCPRGA----NFICNY--GPAGNYPTWPY--KQGATCSACPKDDKCLNNLC--TNPQRDQ 202

  Fly   260 -CMHSELFQTITANDTTSL 277
             ..||..:.....|..|||
  Rat   203 VSRHSADYPKYLRNRYTSL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 32/150 (21%)
Glipr1NP_001011987.1 CAP 32..168 CDD:412178 34/155 (22%)

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