DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and Pi16

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001163952.1 Gene:Pi16 / 294312 RGDID:1304760 Length:483 Species:Rattus norvegicus


Alignment Length:215 Identity:49/215 - (22%)
Similarity:87/215 - (40%) Gaps:67/215 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEFSS 133
            |:.::..||.||..|:       |.|:.||:::||.|||..|....::|...             
  Rat    39 KQTMVELHNHYRAQVS-------PPASDMLQMRWDDELAAFAKAYAQKCVWG------------- 83

  Fly   134 PSYHAVYNKFKAK--EDTFRIVRSQLNA------WYDQYKHVSSSSLIDGLSTAK----KEIGHF 186
                  :||.:.:  |:.|.|....::.      |::::::.:       ||||.    :..||:
  Rat    84 ------HNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYN-------LSTATCDPGQMCGHY 135

  Fly   187 LRMIVGPSNRLGC------AIASIEKGGWTHQWLACLYSCSPQ---KNSLLYEYSGKPGVYCTTG 242
            .:::...:.|:||      .:..:|:.. .| .|.|.|  .|.   |....|: .|.|...|..|
  Rat   136 TQVVWSKTERIGCGSHFCETLQGVEEAN-IH-LLVCNY--EPPGNVKGRKPYQ-EGTPCSQCPLG 195

  Fly   243 ---INGKFQNLCN-DTEPVK 258
               :|    :||. :.:|.|
  Rat   196 YSCVN----SLCEPERKPEK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 36/167 (22%)
Pi16NP_001163952.1 SCP_HrTT-1 39..172 CDD:240186 37/169 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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