DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and scl-17

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:203 Identity:47/203 - (23%)
Similarity:72/203 - (35%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LNHHNTYRDIVAGGQ------MHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEF 131
            |:.||.:|..:|.|.      :| .| |..::|:||:..:|..|.....:|   |..|....|..
 Worm    28 LDAHNEFRSSIAKGTYVTKGLLH-AP-ATNIMKMKWNVTIATAAQNHANKC---PKGHDGPLEGV 87

  Fly   132 SSP---SYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIGHFLRMIVGP 193
            |..   |.|     ..|.:....:......||..:|......:.:.........:||.:.|....
 Worm    88 SGECMWSGH-----INASKGVNHLGAVAAKAWSSEYTKKGWETDVMSDEFFNSGVGHAIIMTWYS 147

  Fly   194 SNRLGCAIASIEK-GGWTHQWLACLYSCSPQKN-SLLYEYSG------KPGVYC--TTGINGKFQ 248
            ...:||.:...:| |.:....:.|.|....|.| .::|| ||      .|...|  .||      
 Worm   148 QVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGNGKIMYE-SGPTCSACPPNTTCDQATG------ 205

  Fly   249 NLCNDTEP 256
             ||:...|
 Worm   206 -LCDSKIP 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 33/155 (21%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 33/155 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161844
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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