DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and scl-17

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:203 Identity:47/203 - (23%)
Similarity:72/203 - (35%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LNHHNTYRDIVAGGQ------MHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEF 131
            |:.||.:|..:|.|.      :| .| |..::|:||:..:|..|.....:|   |..|....|..
 Worm    28 LDAHNEFRSSIAKGTYVTKGLLH-AP-ATNIMKMKWNVTIATAAQNHANKC---PKGHDGPLEGV 87

  Fly   132 SSP---SYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEIGHFLRMIVGP 193
            |..   |.|     ..|.:....:......||..:|......:.:.........:||.:.|....
 Worm    88 SGECMWSGH-----INASKGVNHLGAVAAKAWSSEYTKKGWETDVMSDEFFNSGVGHAIIMTWYS 147

  Fly   194 SNRLGCAIASIEK-GGWTHQWLACLYSCSPQKN-SLLYEYSG------KPGVYC--TTGINGKFQ 248
            ...:||.:...:| |.:....:.|.|....|.| .::|| ||      .|...|  .||      
 Worm   148 QVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGNGKIMYE-SGPTCSACPPNTTCDQATG------ 205

  Fly   249 NLCNDTEP 256
             ||:...|
 Worm   206 -LCDSKIP 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 33/155 (21%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 33/155 (21%)

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