DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and scl-6

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:211 Identity:41/211 - (19%)
Similarity:71/211 - (33%) Gaps:56/211 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KKLILNHHNTYRDIVAGGQMH----RLPIAARMLKLKWDHELALLATILVKRCDL---------- 119
            ::.|::.||::|..:|.|...    ..|..:.:.|:.||..||..|......|..          
 Worm    25 QQFIVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTGFSNTQGTGE 89

  Fly   120 ----QPTDHCISTEEF----SSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGL 176
                :.|...||..:.    :|.|:...:.|:               .|...|   .|..|.|  
 Worm    90 NLYWRTTSANISGLDIYGGAASVSWEQEFQKY---------------GWATNY---FSQELFD-- 134

  Fly   177 STAKKEIGHFLRMIVGPSNRLGCAIASIEKG--GWTHQWLACLYS-CSPQKNSLLYEYSGKPGVY 238
                ..:|:..:|....:|.:||.:.:..|.  |.....:.|.|. .....:.::|. :|.....
 Worm   135 ----TGVGNGTQMAWAKTNLVGCGVKNCGKDSTGLNKVAVVCHYKPLGRYVDQMIYT-AGFTCSQ 194

  Fly   239 CTTGINGKFQNLCNDT 254
            |.||.:      |:.|
 Worm   195 CPTGTS------CDQT 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 33/173 (19%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 34/174 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161819
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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