DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and scl-23

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:233 Identity:57/233 - (24%)
Similarity:88/233 - (37%) Gaps:85/233 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IDVPKHIKKLILNHHNTYRDIVAGGQM----HRLPIAARMLKLKWDHELALLATILVKRCDLQPT 122
            :::|..::.|||:.||..|..||.||.    ..||.|..|:||.||.||.|.|....::|:||  
 Worm   115 LNLPARLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQCNLQ-- 177

  Fly   123 DHCISTEEFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYK-------------HVSSSSL-- 172
                                   ||::.|    |:|.| |:.:             .||.:.|  
 Worm   178 -----------------------KENSGR----QMNGW-DEVRGENAFYFRTTDGLDVSGAVLKG 214

  Fly   173 ---------IDGLSTAK-----KEIGHFLRMIVGPSNRLGCAI--------ASIEKGGWTHQWLA 215
                     |.|:...|     ..|||..:::...:.:||||:        .|::  |..:....
 Worm   215 IQRMGDEIAIAGIKNLKLSRYDSRIGHATQILWKETRKLGCAVQECPARQDGSLD--GQKYNVAV 277

  Fly   216 CLYSCSPQKNSLLYEYSGKPGVY--------CTTGING 245
            |.|  .|..|  :::.|....:|        |:.|..|
 Worm   278 CKY--YPTGN--VFKSSTPTSIYSVGDVASACSEGTFG 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 48/190 (25%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 49/192 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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