DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34002 and scl-3

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_502504.1 Gene:scl-3 / 178252 WormBaseID:WBGene00009896 Length:211 Species:Caenorhabditis elegans


Alignment Length:196 Identity:43/196 - (21%)
Similarity:72/196 - (36%) Gaps:42/196 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KKLILNHHNTYRDIVAGGQMHRLPIA--------ARMLKLKWDHELALLATILVKRCDLQPTDHC 125
            ::.|::.||..|..:|.|..    :|        :.:||:|||..||..|......|   |..|.
 Worm    25 QQFIVDLHNKLRTSIAKGTY----VAKGTTKAAGSNLLKMKWDTTLATAAQTFANTC---PRGHS 82

  Fly   126 ISTE-------EFSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVSSSSLIDGLSTAKKEI 183
            .:..       .:||..:..:        |.:....|.  ||..:::....::.....:.|...|
 Worm    83 NAAGVGENLYWRWSSLPFSGM--------DIYGGAASV--AWEQEFQQYGWTTNTFTQALANTGI 137

  Fly   184 GHFLRMIVGPSNRLGCAIASI----EKGGWTHQWLACLYSCSPQKNSL---LYEYSGKPGVYCTT 241
            ||..:|....:..:||.:.:.    |...:....:.|.|..  |.|.|   :|: ||.....|.|
 Worm   138 GHATQMAWANTGLIGCGVKNCGPDPELNNYNRAVVVCQYKA--QGNYLGQDIYK-SGTTCSACPT 199

  Fly   242 G 242
            |
 Worm   200 G 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 33/168 (20%)
scl-3NP_502504.1 SCP 23..176 CDD:214553 33/167 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161795
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.