DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and lon-1

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_498166.1 Gene:lon-1 / 175753 WormBaseID:WBGene00003055 Length:312 Species:Caenorhabditis elegans


Alignment Length:241 Identity:53/241 - (21%)
Similarity:87/241 - (36%) Gaps:74/241 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KHIKKLILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEE 130
            :::||.|.:.||.||.:|....|:         .|.|..|||..|......||.:.:...|:..|
 Worm    78 EYLKKWITHEHNRYRRMVPASDMN---------MLYWSDELAASAQRHADTCDFRHSRGRINVGE 133

  Fly   131 --FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQ-----------YKHVSSSSLIDGLSTAKKE 182
              :::|     |:.:.          ..::.|:::           |||.               
 Worm   134 NIWAAP-----YSNYS----------DAISIWFNEVHNPRCGCNHAYKHC--------------- 168

  Fly   183 IGHFLRMIVGPSNRLGCAIASIE--KGGW---THQWLACLYSCSPQKNSLLYEYSGK----PGVY 238
            .||:::::...:|.:||..:...  :|.|   ......|.|  :||.|::.....|:    |...
 Worm   169 CGHYVQVVWAKTNLVGCGFSRCRDVQGVWGRGHRNVFVCHY--NPQGNTVFVTARGQLYAMPAFT 231

  Fly   239 CTTGINGKFQNLCNDTEPVKDCMHS--------ELFQTITANDTTS 276
            ..:|.|||..| |....|.  |...        |...|.|.:.|||
 Worm   232 WASGDNGKCSN-CPANAPA--CYQGLCYMPKNYEAPTTTTESTTTS 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 33/167 (20%)
lon-1NP_498166.1 SCP 81..211 CDD:214553 34/170 (20%)

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