DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34002 and LOC1275110

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_314286.5 Gene:LOC1275110 / 1275110 VectorBaseID:AGAMI1_005932 Length:283 Species:Anopheles gambiae


Alignment Length:255 Identity:80/255 - (31%)
Similarity:110/255 - (43%) Gaps:38/255 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NYCHLKNCPADKKLPHIGCNNSGSWSPKC-GKDPKIIDVPKHIKKLILNHHNTYRDIVAGGQMHR 90
            :||....||..|:....||..:.|:.|.| ||.||:....|...:.||:.||..|.:.|.|.:|.
Mosquito    30 DYCDNNYCPPRKENIGCGCKFNESYGPACTGKSPKLHKFTKKDLQFILHTHNHLRHLFACGSIHH 94

  Fly    91 LPIAARMLKLKWDHELALLATILVKRCDLQPTDHCISTEEFSSPSYHAVYN---------KFKAK 146
            ...|.||::|:.|.:|..||...|||| :...|.|.|||.:.    :|..|         ..|..
Mosquito    95 YRPAVRMVQLRVDEDLQTLAECNVKRC-IYEHDDCRSTERYR----YAGQNIARRTVCGRTLKLT 154

  Fly   147 EDTFRIVRSQLNAWYDQYKHVSSSSLIDGLS-----TAKKEIGHFLRMIVGPSNRLGCAI----A 202
            |    ||.|.||||:|:|...|    |:.|:     ..||.||||..::......:|||:    |
Mosquito   155 E----IVNSSLNAWFDEYWDTS----IEMLTKYPNHPVKKPIGHFTLLVNDNVYFIGCALISYAA 211

  Fly   203 SIEK------GGWTHQWLACLYSCSPQKNSLLYEYSGKPGVYCTTGINGKFQNLCNDTEP 256
            .||.      ......:..|.||.....|...|.....|...|.:..:.::..||:|.||
Mosquito   212 RIEAYFTATGEDCREYYFVCNYSFINLINRATYTVGDNPASMCQSHRSKQYHCLCSDREP 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 54/173 (31%)
LOC1275110XP_314286.5 None

Return to query results.
Submit another query.