DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and crispld2

DIOPT Version :9

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:245 Identity:59/245 - (24%)
Similarity:93/245 - (37%) Gaps:65/245 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQ--PTDHCISTEE---- 130
            ||..||..|     |:::  |.|:.|..:.||.||...||...::|..:  |.|..:|..:    
Zfish    64 ILKLHNKLR-----GEVY--PTASNMEYMIWDDELERSATSWAEQCQWEHGPQDLLMSIGQNLAV 121

  Fly   131 ----FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQ-------YKHVSSSSLIDGLSTAKKEIG 184
                :.||:||                   :.||||:       |.|..:....:..|...  ..
Zfish   122 HWGRYRSPAYH-------------------VQAWYDEVKDYTYPYPHECNPWCPERCSGPM--CT 165

  Fly   185 HFLRMIVGPSNRLGCAIASIEK-GGWTHQW-----LACLYSCSPQKN---SLLYEYSGKPGVYCT 240
            |:.:::...:||:|||:....: ..|...|     |.|.|  ||:.|   ...|:: |:|...|.
Zfish   166 HYTQLVWATTNRVGCAVHVCPRMNVWGEIWENAVYLVCNY--SPKGNWIGEAPYQH-GRPCSQCP 227

  Fly   241 TGINGKFQ-NLCNDTEPVKDCMHSELFQTITANDTTSLIRSMLNRQTQPR 289
            ....|..: |||...:       ||..:|...|:.......:..|.|.|:
Zfish   228 PSYGGVCRDNLCYKRD-------SERQETPEMNEVEKPQEPLQPRTTPPK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 SCP_euk 69..219 CDD:240180 40/169 (24%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 41/171 (24%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585659
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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