DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34002 and crispld2

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:245 Identity:59/245 - (24%)
Similarity:93/245 - (37%) Gaps:65/245 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQ--PTDHCISTEE---- 130
            ||..||..|     |:::  |.|:.|..:.||.||...||...::|..:  |.|..:|..:    
Zfish    64 ILKLHNKLR-----GEVY--PTASNMEYMIWDDELERSATSWAEQCQWEHGPQDLLMSIGQNLAV 121

  Fly   131 ----FSSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQ-------YKHVSSSSLIDGLSTAKKEIG 184
                :.||:||                   :.||||:       |.|..:....:..|...  ..
Zfish   122 HWGRYRSPAYH-------------------VQAWYDEVKDYTYPYPHECNPWCPERCSGPM--CT 165

  Fly   185 HFLRMIVGPSNRLGCAIASIEK-GGWTHQW-----LACLYSCSPQKN---SLLYEYSGKPGVYCT 240
            |:.:::...:||:|||:....: ..|...|     |.|.|  ||:.|   ...|:: |:|...|.
Zfish   166 HYTQLVWATTNRVGCAVHVCPRMNVWGEIWENAVYLVCNY--SPKGNWIGEAPYQH-GRPCSQCP 227

  Fly   241 TGINGKFQ-NLCNDTEPVKDCMHSELFQTITANDTTSLIRSMLNRQTQPR 289
            ....|..: |||...:       ||..:|...|:.......:..|.|.|:
Zfish   228 PSYGGVCRDNLCYKRD-------SERQETPEMNEVEKPQEPLQPRTTPPK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 40/169 (24%)
crispld2XP_003199065.1 CAP_CRISPLD2 61..206 CDD:349410 41/171 (24%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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