DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34002 and crispld1a

DIOPT Version :10

Sequence 1:NP_001034029.2 Gene:CG34002 / 3885644 FlyBaseID:FBgn0054002 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_073796804.1 Gene:crispld1a / 100149104 ZFINID:ZDB-GENE-090612-1 Length:508 Species:Danio rerio


Alignment Length:412 Identity:80/412 - (19%)
Similarity:130/412 - (31%) Gaps:140/412 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TGLLLLFGLNLVFLLPETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKKLIL 73
            |||.||.....||.:...|...| ....:|.|.....:::|....:..:..:.|....  .:.||
Zfish    10 TGLFLLLVTRTVFAMVLFNATDL-GFLLEKYLEDDADDDAGDRVMERQRGKRAITASD--MQAIL 71

  Fly    74 NHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRC-------DLQPTDHCISTEEF 131
            :.||..|     ||::  |.|:.|..:.||:||...|....:.|       .|.|          
Zfish    72 DLHNKLR-----GQVY--PPASNMEYMVWDNELERSAEEWAETCLWEHGPAGLLP---------- 119

  Fly   132 SSPSYHAVYNKFKAKEDTFRIVRSQLNAWYDQYKHVS---------------SSSLIDGLSTAKK 181
                  .:..........:|...|.:.||||:.|..|               |..:..       
Zfish   120 ------QIGQNLGVHWGRYRPPTSHVQAWYDEVKDYSFPYPQECNPHCPFRCSGPVCT------- 171

  Fly   182 EIGHFLRMIVGPSNRLGCAI-ASIEKGGWTHQW-----LACLYS-------------------CS 221
               |:.:::...|:|:|||| .......|...|     |.|.||                   |.
Zfish   172 ---HYTQLVWATSSRIGCAINVCYNMNVWGQIWAKAVYLVCNYSPKGNWWGYAPYKHGTSCSACP 233

  Fly   222 PQ-----KNSLLYEYSGK----------------------PG----------------------- 236
            |.     :.:|.|:..||                      ||                       
Zfish   234 PSYGGVCRENLCYKGDGKNRQSPSEETHERNSIEPEAPHSPGPRLRPPSPTRHPNAVVSKEQMSQ 298

  Fly   237 -VYCTTGINGKFQ-NLCNDTEPVKDCMHS--ELFQTITANDTTSLIRSMLNRQTQPRTFGW--LW 295
             |.|.|.:..:.: ..||..|....|:.|  ::..|:..:..:|:.|:.::........||  :.
Zfish   299 TVTCDTKLRDQCKGTTCNRYECPAGCLDSMVKVVGTVYYDMQSSICRAGIHYGVIDNDGGWVDVT 363

  Fly   296 NWGKKIWGWVKNAWNAIVGCGK 317
            ..|:|.: ::|:..|.:...||
Zfish   364 RQGRKDF-FIKSYKNGLQSHGK 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34002NP_001034029.2 CAP_euk 69..219 CDD:349399 38/177 (21%)
crispld1aXP_073796804.1 None

Return to query results.
Submit another query.