Protein Alignment CG34002 and R3hdml

DIOPT Version :10

• Sequence 1: NP_001034029.2
• Gene: CG34002 / 3885644
• FlyBaseID: FBgn0054002
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001092801.1
• Gene: R3hdml / 100043899
• MGIID: 3650937
• Length: 253
• Species: Mus musculus
• Alignment Length: 279
• Identity: 72/279 - (25%)
• Similarity: 103/279 - (36%)
• Gaps: 84/279 - (30%)

  Fly     9 TGLLLLFGLNLVFL-LPETNYCHLKNCPADKKLPHIGCNNSGSWSPKCGKDPKIIDVPKHIKK-- 70
            |||||..|..:..| :|.|..  ::..|          .|:..| |..|     :.||:|.:|
Mouse    11 TGLLLWMGHTVGALRMPNTTL--VQGRP----------KNTAVW-PLSG-----LGVPRHRRKRH 57

  Fly    71 -------LILNHHNTYRDIVAGGQMHRLPIAARMLKLKWDHELALLATILVKRCDLQPTDHCIST 128
                   .:|::||..|     ..:|  |.||.|..:.||.:||..|.....:        ||.|
Mouse    58 ISARDMSALLDYHNHIR-----ASVH--PPAANMEYMVWDEQLARSAEAWATQ--------CIWT 107

  Fly   129 EEFSSPSYHAVY--NKFKAKEDTFRIVRSQLNAWYDQYKHVSSSS----------LIDGLSTAKK 181
            .   .||....|  .........||.|...:.:|.::.:|.|..:          |..|     .
Mouse   108 H---GPSQLMKYVGQNLSIHSGRFRSVVDLVRSWSEEKRHYSFPAPKDCTPHCPWLCSG-----P 164

  Fly   182 EIGHFLRMIVGPSNRLGCAI---ASIEKGGWTHQ---WLACLYSC-------SPQKNSLLYEYSG 233
            ...|:.:|:...|:||||||   :||...|.|.|   :|.|.|:.       :|.|       :|
Mouse   165 VCSHYTQMVWASSSRLGCAINTCSSINVWGNTWQQAVYLVCNYAIKGNWIGEAPYK-------AG 222

  Fly   234 KPGVYCTTGINGKF-QNLC 251
            ||...|.....|.. .|:|
Mouse   223 KPCSACPPSYQGNCNSNMC 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34002	NP_001034029.2	CAP_euk	69..219	CDD:349399	45/176 (26%)
R3hdml	NP_001092801.1	CAP_R3HDML	63..208	CDD:349409	44/167 (26%)