DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33966 and ttpal

DIOPT Version :9

Sequence 1:NP_001033984.1 Gene:CG33966 / 3885642 FlyBaseID:FBgn0053966 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_001016176.1 Gene:ttpal / 548930 XenbaseID:XB-GENE-976635 Length:338 Species:Xenopus tropicalis


Alignment Length:301 Identity:95/301 - (31%)
Similarity:142/301 - (47%) Gaps:27/301 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSPELQKTAIENLNEVPNKLDDDIAALRDWI-KQQPHLKARTDDQFLVNFLRGCKFSLERTKSKI 70
            |||||...|.|.|.|.|.....|:.||||.: |..||||.|.||.||:.|||..||..:|....:
 Frog    32 LSPELVLKAREELQEKPEWRLRDVQALRDMVWKDYPHLKTRVDDSFLLRFLRARKFDYDRALQLL 96

  Fly    71 DRFYTLRTKYPEFYLGHNVDVDKALEIFRLGTIVILPRPLNDNGPRLALLRMACYDPSKYTLQEV 135
            ..:|:.|..:||.:........|  .:...|.:.:||. .:..|.|:..:|..|:.|..|.:.|.
 Frog    97 VNYYSCRKAWPEVFTDLRPSAVK--PVLDSGFLTVLPH-TDTEGRRIVCIRPGCWIPRDYPITEN 158

  Fly   136 NRAAGLMQQIMLDEDDVAIVNGLISILDLSNVTTGHFLQMSPSFAKKMTVFQEEALPLRPQGIHF 200
            .||..|..:.:::.::.. |||::.:.|.:.|...|.....|..|||:....::..|:|.:.::.
 Frog   159 IRAIYLSLEKLVESEETQ-VNGIVILADYNGVGLTHASHFGPFIAKKVIGILQDGFPIRIKAVNV 222

  Fly   201 INTPNGFDTIFNMIKPMMSKKQQGRLYVHGSKWEALYNQIPKQYLPVEYGGENGSIPELLQQWEQ 265
            ||.|..|..||.::||.:.:|...|.::|||...:|:..|||..||.||||..|.:.  ...|.|
 Frog   223 INEPRIFKGIFAILKPFLKEKIVKRFFLHGSDLNSLHANIPKSILPEEYGGTAGKLD--TTAWSQ 285

  Fly   266 RILAYRNYWEEEKNYGTDESLRVGQPVDFESLFGLQGSFRQ 306
            .:|      :.|:              ||...|||....|:
 Frog   286 ILL------DSEE--------------DFAVHFGLAHPTRE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33966NP_001033984.1 CRAL_TRIO_N 30..72 CDD:215024 20/42 (48%)
SEC14 96..252 CDD:238099 47/155 (30%)
ttpalNP_001016176.1 CRAL_TRIO_N 53..99 CDD:215024 21/45 (47%)
SEC14 119..274 CDD:238099 48/158 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1031056at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.