DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33966 and Clvs1

DIOPT Version :10

Sequence 1:NP_001033984.1 Gene:CG33966 / 3885642 FlyBaseID:FBgn0053966 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:288 Identity:83/288 - (28%)
Similarity:146/288 - (50%) Gaps:33/288 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSPE-LQKTAIENLNEVPNKLDDDIAALRDWIKQQPHLK-ARTDDQFLVNFLRGCKFSLERTKSK 69
            |||: ::|..:| |||.|:.|..||..:||.|..:|.:. .||||.|::.|||..||      .:
  Rat    30 LSPDTIEKARLE-LNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKF------HQ 87

  Fly    70 IDRFYTLRTKYPEFYLGHNVDVDKALEIFRLGTIVILPRPLNDN-----------GPRLALLRMA 123
            .|.|..|...:.  |...|:|:.|..:....|    :.|.|.|.           |.::.||..|
  Rat    88 ADAFRLLAQYFQ--YRQLNLDMFKNFKADDPG----IKRALIDGFPGVLENRDHYGRKILLLFAA 146

  Fly   124 CYDPSKYTLQEVNRAAGLMQQIMLDEDDVAIVNGLISILDLSNVTTGHFLQMSPSFAKKMTVFQE 188
            .:|.|:.:..::.||..|..::::::.::.| ||.|.|:|.||.:.....:::||..|......:
  Rat   147 NWDQSRNSFTDILRAILLSLEVLIEDPELQI-NGFILIIDWSNFSFKQASKLTPSILKLAIEGLQ 210

  Fly   189 EALPLRPQGIHFINTPNGFDTIFNMIKPMMSKKQQGRLYVHGSKWEALYNQIPKQYLPVEYGGEN 253
            ::.|.|..|:||:|.|.....::.:|||.:..|.:.|:::||:...:|:..|..::||.|:|   
  Rat   211 DSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFG--- 272

  Fly   254 GSIPEL-LQQWEQRILAYRNYWEEEKNY 280
            |::|.. :..|.:.:|.  ..:.:|.:|
  Rat   273 GTLPPYDMGTWARTLLG--PDYSDENDY 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33966NP_001033984.1 CRAL_TRIO_N 30..72 CDD:215024 15/42 (36%)
CRAL_TRIO 113..251 CDD:459890 39/148 (26%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 19/51 (37%)
SEC14 123..274 CDD:469559 41/154 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.

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