DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33966 and Rlbp1

DIOPT Version :9

Sequence 1:NP_001033984.1 Gene:CG33966 / 3885642 FlyBaseID:FBgn0053966 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_001099744.1 Gene:Rlbp1 / 293049 RGDID:1309649 Length:317 Species:Rattus norvegicus


Alignment Length:288 Identity:71/288 - (24%)
Similarity:128/288 - (44%) Gaps:37/288 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PAIRPLSP----ELQKTAIENLNEVPNKLDDDIAALRDWIKQQ------------PHLKARTDDQ 50
            |...|.|.    .||| |.:.|||.....|:.:..|::.::.|            ..::|| |..
  Rat    32 PVFGPCSQLPRHTLQK-AKDELNEREETRDEAVRELQELVQAQAASGEELAVAVAERVQAR-DSA 94

  Fly    51 FLVNFLRGCKFSLERTKSKIDRFYTLRTKYPEFYLGHNVDVDK-ALEIFRLGTIVILPRPLNDN- 113
            ||:.|:|..||.:.|....:..:...|.:|||.:       |. ::|..|.......|..|:.. 
  Rat    95 FLLRFIRARKFDVGRAYELLKGYVNFRLQYPELF-------DSLSMEALRCTIEAGYPGVLSSRD 152

  Fly   114 --GPRLALLRMACYDPSKYTLQEVNRAAGLMQQIMLDEDDVAIVNGLISILDLSNVTTGHFLQMS 176
              |..:.|..:..:...:.|..|:.:|...:.:.:|:.::..| ||...:.:....|......:.
  Rat   153 KYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQI-NGFCIVENFKGFTMQQAAGLR 216

  Fly   177 PSFAKKMTVFQEEALPLRPQGIHFINTPNGFDTIFNMIKPMMSKKQQGRLYVHGSKWEALYNQIP 241
            ||..|||....:::.|.|.:.||||:.|..|.|.:|::||.:..|...|::|||...:..:.:|.
  Rat   217 PSDLKKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEID 281

  Fly   242 KQYLPVEYGGENGSIPELLQQWEQRILA 269
            :..||.::||       .|.:::.:::|
  Rat   282 ENILPADFGG-------TLPKYDGKVVA 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33966NP_001033984.1 CRAL_TRIO_N 30..72 CDD:215024 12/53 (23%)
SEC14 96..252 CDD:238099 40/158 (25%)
Rlbp1NP_001099744.1 CRAL_TRIO_N 60..117 CDD:215024 13/57 (23%)
CRAL_TRIO 143..292 CDD:279044 39/156 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339630
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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